| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241913
Identifier: 148241913
GI number: 148241913
Start: 741125
End: 741880
Strand: Direct
Name: 148241913
Synonym: SynRCC307_0814
Alternate gene names: NA
Gene position: 741125-741880 (Clockwise)
Preceding gene: 148241910
Following gene: 148241915
Centisome position: 33.31
GC content: 61.9
Gene sequence:
>756_bases TTGGCCCAGCGCAAAGGTGGATCCTCTGTGGCGATTACCGGTACGCGGGTGGACCCCGAGGCCAATGGCCCCAGCTGCGT CACGGTGACCACCGACAGCGAAGGGCATCGGATCACCAGGCAAGGCAGTGATGTGGGCGCCATTGAGCTGCGCACCCATG TCTTTATTGATTCCCTGCAGCCCCAGTTGGCGGCCTACATGGGCACCGTCTCCCAGGGCTTTTTGCCAATCCCAGGTGAT GCCTGTCTCTGGCTGGAAGTGTCGCCGGGCATGGCGGTTCACCGCGTCACCGACATTGCCCTTAAGGCCAGCACAGTCCG GCTTGGCCAGATGGTGGTGGAGCGGGCCTTTGGTTCGCTGGCCCTTTATCACCGCGACCAAAGCACGGTGCTGCATTCCG GCCAGGTGGTGCTGGAAGCCATTGGCAGCCGCATTGAACAGCGCAGCCCTTGCACCGTTACCTGGACGGAGATCATCCGG GCAATCACGCCCGACCATGCCGTGCTGATTAACCGTCAGAACCGCCGCGGTTCGATGATTCAGGCCGGCATGAGCATGTT CATCCTCGAAACCGAACCCGCTGGCTATGTGCTCATCGCCGCCAATGAAGCCGAAAAGGCTTCCAACATCACCGTTGTTG ATGTCAAAGCAGTGGGTGCCTTCGGGCGTCTGACCTTGGCGGGCCGCGAGGGTGATGTGGAGGAAGCCGCGGCTGCCGCG ATGCGGGCGGTGGCCAGCATCAACAGCTCCACTTAA
Upstream 100 bases:
>100_bases GAAAAAAATATGTAGCCCTGGCCGTTAAAGTCCCCACCGACTTGGGACTCATGGCCACCTGGCGGATTTAGCTGCCGATC GATCCGCCCGGAATCTGCGC
Downstream 100 bases:
>100_bases ACCCCAAACAATTGCCGCATCTGCTGGGAGATCTGGCGCATCGCTTTGCCGCGGCTGCCTAGTTTGCTGCGTTGGTGTTG ATTCATCGCGGCGTAGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAQRKGGSSVAITGTRVDPEANGPSCVTVTTDSEGHRITRQGSDVGAIELRTHVFIDSLQPQLAAYMGTVSQGFLPIPGD ACLWLEVSPGMAVHRVTDIALKASTVRLGQMVVERAFGSLALYHRDQSTVLHSGQVVLEAIGSRIEQRSPCTVTWTEIIR AITPDHAVLINRQNRRGSMIQAGMSMFILETEPAGYVLIAANEAEKASNITVVDVKAVGAFGRLTLAGREGDVEEAAAAA MRAVASINSST
Sequences:
>Translated_251_residues MAQRKGGSSVAITGTRVDPEANGPSCVTVTTDSEGHRITRQGSDVGAIELRTHVFIDSLQPQLAAYMGTVSQGFLPIPGD ACLWLEVSPGMAVHRVTDIALKASTVRLGQMVVERAFGSLALYHRDQSTVLHSGQVVLEAIGSRIEQRSPCTVTWTEIIR AITPDHAVLINRQNRRGSMIQAGMSMFILETEPAGYVLIAANEAEKASNITVVDVKAVGAFGRLTLAGREGDVEEAAAAA MRAVASINSST >Mature_250_residues AQRKGGSSVAITGTRVDPEANGPSCVTVTTDSEGHRITRQGSDVGAIELRTHVFIDSLQPQLAAYMGTVSQGFLPIPGDA CLWLEVSPGMAVHRVTDIALKASTVRLGQMVVERAFGSLALYHRDQSTVLHSGQVVLEAIGSRIEQRSPCTVTWTEIIRA ITPDHAVLINRQNRRGSMIQAGMSMFILETEPAGYVLIAANEAEKASNITVVDVKAVGAFGRLTLAGREGDVEEAAAAAM RAVASINSST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26625; Mature: 26493
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRKGGSSVAITGTRVDPEANGPSCVTVTTDSEGHRITRQGSDVGAIELRTHVFIDSLQ CCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCC PQLAAYMGTVSQGFLPIPGDACLWLEVSPGMAVHRVTDIALKASTVRLGQMVVERAFGSL HHHHHHHHHHHCCCEECCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCE ALYHRDQSTVLHSGQVVLEAIGSRIEQRSPCTVTWTEIIRAITPDHAVLINRQNRRGSMI EEEECCCCCEEECCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHH QAGMSMFILETEPAGYVLIAANEAEKASNITVVDVKAVGAFGRLTLAGREGDVEEAAAAA HCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHH MRAVASINSST HHHHHHCCCCC >Mature Secondary Structure AQRKGGSSVAITGTRVDPEANGPSCVTVTTDSEGHRITRQGSDVGAIELRTHVFIDSLQ CCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCC PQLAAYMGTVSQGFLPIPGDACLWLEVSPGMAVHRVTDIALKASTVRLGQMVVERAFGSL HHHHHHHHHHHCCCEECCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCE ALYHRDQSTVLHSGQVVLEAIGSRIEQRSPCTVTWTEIIRAITPDHAVLINRQNRRGSMI EEEECCCCCEEECCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHH QAGMSMFILETEPAGYVLIAANEAEKASNITVVDVKAVGAFGRLTLAGREGDVEEAAAAA HCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHH MRAVASINSST HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA