| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is nanE [H]
Identifier: 148241777
GI number: 148241777
Start: 614907
End: 615644
Strand: Direct
Name: nanE [H]
Synonym: SynRCC307_0678
Alternate gene names: 148241777
Gene position: 614907-615644 (Clockwise)
Preceding gene: 148241776
Following gene: 148241778
Centisome position: 27.64
GC content: 65.72
Gene sequence:
>738_bases GTGGGATGGCCCCCAAATCGACCGCCTCGCCTCGTGAACCAGGGCGCTGCGCTGGCCCTGCCCAAGGGCCTGATCGTGTC GGTGCAGGCCCCGGCAGGATCGCCGATGCGGGATCCCGATGTGATTGCCGCTATGGCGGAAGCCAGCCTGCGCAATGGCG CGGTGGGGGTTCGCCTTGAGAGCCCAGAGCACATCGGTGCAGTGCGCCAGCGCTGCCCCAAGGCCCTGATCATTGGCCTG TGGAAGCGCACGTTTCCGGGTAGTTCCGTCTACATCACCCCGGGTTGGCAGGAGGTCTCTGCGGTCTGGTCGGCCGGGGC CGATGTGGTGGCGATCGATGCCACCGAGCGGCCGCGCCCCGACGGTGAGCCTTTGGCCTCACTGGTGGAGCGCGTCCAGC GTGAACTGGGGGCGCCTTTGATGGCGGATGTCGACAGCCTCGCCAATGGCCTTGAGGCGGCTCGTTTGGGGTGCCAATGG GTGGGCACCACCTTGTTCGGTTACACCGAGGCCACCGCTGCGGCTCAGCCGCCGGCCTGGGATCTTTTGGGCCCCTTACG CCAGCAACTCCCTGCCGGTGTTGGCTTGATCTGCGAAGGCGGCATTGCTTCAGCTGAAGCGGCGGCACAAGCGCTGCGTT TGGGCGCTGATGCTGTGGTGGTAGGAACAGCGATCACCGGTGTTGATCTGCAGGTGCAGCGCTACACCCGCGAACTCCAA AAACCAGTCACCAACTAA
Upstream 100 bases:
>100_bases TCGCTGAAGAAAGTGCTCCGCCAGTTGAAGAGACGCTGGAACAGCCTCCAGTGCCGGCTCCGGCGCCGATCAAAACGGCA TTGCAGGGATGGTTGCCCCA
Downstream 100 bases:
>100_bases AAAAAGGGGCGGTTAAGGTTTCCTTCCGTATTCACCTGCTCGCTGGGGTTGGGTGCTTTGGGGGTCCTGATGGCGTACGC GCTTCTTCCGGTGTTGTTGG
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MGWPPNRPPRLVNQGAALALPKGLIVSVQAPAGSPMRDPDVIAAMAEASLRNGAVGVRLESPEHIGAVRQRCPKALIIGL WKRTFPGSSVYITPGWQEVSAVWSAGADVVAIDATERPRPDGEPLASLVERVQRELGAPLMADVDSLANGLEAARLGCQW VGTTLFGYTEATAAAQPPAWDLLGPLRQQLPAGVGLICEGGIASAEAAAQALRLGADAVVVGTAITGVDLQVQRYTRELQ KPVTN
Sequences:
>Translated_245_residues MGWPPNRPPRLVNQGAALALPKGLIVSVQAPAGSPMRDPDVIAAMAEASLRNGAVGVRLESPEHIGAVRQRCPKALIIGL WKRTFPGSSVYITPGWQEVSAVWSAGADVVAIDATERPRPDGEPLASLVERVQRELGAPLMADVDSLANGLEAARLGCQW VGTTLFGYTEATAAAQPPAWDLLGPLRQQLPAGVGLICEGGIASAEAAAQALRLGADAVVVGTAITGVDLQVQRYTRELQ KPVTN >Mature_244_residues GWPPNRPPRLVNQGAALALPKGLIVSVQAPAGSPMRDPDVIAAMAEASLRNGAVGVRLESPEHIGAVRQRCPKALIIGLW KRTFPGSSVYITPGWQEVSAVWSAGADVVAIDATERPRPDGEPLASLVERVQRELGAPLMADVDSLANGLEAARLGCQWV GTTLFGYTEATAAAQPPAWDLLGPLRQQLPAGVGLICEGGIASAEAAAQALRLGADAVVVGTAITGVDLQVQRYTRELQK PVTN
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=221, Percent_Identity=38.4615384615385, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 25602; Mature: 25470
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWPPNRPPRLVNQGAALALPKGLIVSVQAPAGSPMRDPDVIAAMAEASLRNGAVGVRLE CCCCCCCCHHHHCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC SPEHIGAVRQRCPKALIIGLWKRTFPGSSVYITPGWQEVSAVWSAGADVVAIDATERPRP CCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCC DGEPLASLVERVQRELGAPLMADVDSLANGLEAARLGCQWVGTTLFGYTEATAAAQPPAW CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCH DLLGPLRQQLPAGVGLICEGGIASAEAAAQALRLGADAVVVGTAITGVDLQVQRYTRELQ HHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH KPVTN CCCCC >Mature Secondary Structure GWPPNRPPRLVNQGAALALPKGLIVSVQAPAGSPMRDPDVIAAMAEASLRNGAVGVRLE CCCCCCCHHHHCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC SPEHIGAVRQRCPKALIIGLWKRTFPGSSVYITPGWQEVSAVWSAGADVVAIDATERPRP CCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCC DGEPLASLVERVQRELGAPLMADVDSLANGLEAARLGCQWVGTTLFGYTEATAAAQPPAW CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCH DLLGPLRQQLPAGVGLICEGGIASAEAAAQALRLGADAVVVGTAITGVDLQVQRYTRELQ HHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH KPVTN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA