| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148241731
Identifier: 148241731
GI number: 148241731
Start: 573639
End: 574505
Strand: Direct
Name: 148241731
Synonym: SynRCC307_0632
Alternate gene names: NA
Gene position: 573639-574505 (Clockwise)
Preceding gene: 148241730
Following gene: 148241732
Centisome position: 25.78
GC content: 58.13
Gene sequence:
>867_bases GTGATGCAGCTGCAAGCTCACGACCTCTTGCCCGGTTGCCGGGTTGATGACCCCGCTTGCGACTGGGCCCAGATTCAGCT GCAGATGCGCGAGGGCGTTCAGCTCTCTCCTTTGTTGCCCCTTGGCGGTGATGCCGGCCTGGTGTGGGTTCCCAAAAACG GTTGCAGCACCCTGAAGCGGGTATGGCTGCAACTCCAAGGCGCCGATTGTCAGCGGCCTGGGTTTGATCCCCACAGCGCT GCACTGCCCTTCACCCATTGGTTGAATCCAGACGAACTGCGCGCCGTTTCGCACTATCGCTTCCTCGTGGCGATTTGGCG CGATCCAATCGATCGCTTTGTTTCGGCTTGCCGTAGTCATTTGGTTGAGCTCACCACCGCTGCGATTTACGCCAAGTTGC GTTCATCCAGCCCTGATCAGAGTGGTTTCGAGAATGCCTTGCGCTTTCACGATGAATTGTTTGCAGGCCACGGCGTTCAC TCTTTTGCCGATGACGCTGATCCGGTTGATGTGATGAACCAGACCGCCCTGCAACTTCCGGCTTGGATTGCCTGTCATAT CGATTGGAGCCATCACACCATTCCCCAGGTCAGCTTTCTCGGTGGTGACCCGCGTTGCTATCGCACGATTTTGGGCATGG AGCAGATCGATGCATTGATGGCCCATTGGTCCAAGGCATCGGGCTTGCCGCTCGATCTCACCCCGCAGCATGTCTCCAGA GAGCAGGCTTCCAACAATCCTTGGCGGCGTTTGCGGCGCGATCAACTCAGCAGCGAAGCGCTTGCAGCCTTGGAGCGGTT TTATGCAGCGGACTGGGCCTTTTTGGAGTTGGCGCAGCAGCAGTTAGGGGCTTGGCAAGCGGCATGA
Upstream 100 bases:
>100_bases AGTCAGTCGCTGAAGCGTTCCAGTTGGCGGTGGAAACCATCTGCCGGCAAGTCCCTGCGGTGGGTCAGCAACCGGCTGAG ATTTTGCCGCTGGCGGCGTA
Downstream 100 bases:
>100_bases CAGACGCTTTCCCCTCATTAATGCGGGGACGTTCCGAGCCAGAGCGGCAGCAGTGGGCCCGCTGGGTTTTGGGGAGCCAC AGCGATCTGTTCCTTCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MMQLQAHDLLPGCRVDDPACDWAQIQLQMREGVQLSPLLPLGGDAGLVWVPKNGCSTLKRVWLQLQGADCQRPGFDPHSA ALPFTHWLNPDELRAVSHYRFLVAIWRDPIDRFVSACRSHLVELTTAAIYAKLRSSSPDQSGFENALRFHDELFAGHGVH SFADDADPVDVMNQTALQLPAWIACHIDWSHHTIPQVSFLGGDPRCYRTILGMEQIDALMAHWSKASGLPLDLTPQHVSR EQASNNPWRRLRRDQLSSEALAALERFYAADWAFLELAQQQLGAWQAA
Sequences:
>Translated_288_residues MMQLQAHDLLPGCRVDDPACDWAQIQLQMREGVQLSPLLPLGGDAGLVWVPKNGCSTLKRVWLQLQGADCQRPGFDPHSA ALPFTHWLNPDELRAVSHYRFLVAIWRDPIDRFVSACRSHLVELTTAAIYAKLRSSSPDQSGFENALRFHDELFAGHGVH SFADDADPVDVMNQTALQLPAWIACHIDWSHHTIPQVSFLGGDPRCYRTILGMEQIDALMAHWSKASGLPLDLTPQHVSR EQASNNPWRRLRRDQLSSEALAALERFYAADWAFLELAQQQLGAWQAA >Mature_288_residues MMQLQAHDLLPGCRVDDPACDWAQIQLQMREGVQLSPLLPLGGDAGLVWVPKNGCSTLKRVWLQLQGADCQRPGFDPHSA ALPFTHWLNPDELRAVSHYRFLVAIWRDPIDRFVSACRSHLVELTTAAIYAKLRSSSPDQSGFENALRFHDELFAGHGVH SFADDADPVDVMNQTALQLPAWIACHIDWSHHTIPQVSFLGGDPRCYRTILGMEQIDALMAHWSKASGLPLDLTPQHVSR EQASNNPWRRLRRDQLSSEALAALERFYAADWAFLELAQQQLGAWQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32330; Mature: 32330
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQLQAHDLLPGCRVDDPACDWAQIQLQMREGVQLSPLLPLGGDAGLVWVPKNGCSTLKR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHH VWLQLQGADCQRPGFDPHSAALPFTHWLNPDELRAVSHYRFLVAIWRDPIDRFVSACRSH HHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVELTTAAIYAKLRSSSPDQSGFENALRFHDELFAGHGVHSFADDADPVDVMNQTALQLP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCC AWIACHIDWSHHTIPQVSFLGGDPRCYRTILGMEQIDALMAHWSKASGLPLDLTPQHVSR EEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH EQASNNPWRRLRRDQLSSEALAALERFYAADWAFLELAQQQLGAWQAA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMQLQAHDLLPGCRVDDPACDWAQIQLQMREGVQLSPLLPLGGDAGLVWVPKNGCSTLKR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHH VWLQLQGADCQRPGFDPHSAALPFTHWLNPDELRAVSHYRFLVAIWRDPIDRFVSACRSH HHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVELTTAAIYAKLRSSSPDQSGFENALRFHDELFAGHGVHSFADDADPVDVMNQTALQLP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCC AWIACHIDWSHHTIPQVSFLGGDPRCYRTILGMEQIDALMAHWSKASGLPLDLTPQHVSR EEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH EQASNNPWRRLRRDQLSSEALAALERFYAADWAFLELAQQQLGAWQAA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA