Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241705

Identifier: 148241705

GI number: 148241705

Start: 540066

End: 541121

Strand: Direct

Name: 148241705

Synonym: SynRCC307_0606

Alternate gene names: NA

Gene position: 540066-541121 (Clockwise)

Preceding gene: 148241704

Following gene: 148241706

Centisome position: 24.27

GC content: 67.05

Gene sequence:

>1056_bases
ATGTTGAGCCCCGATGCACCGGTGCTGCTGCTGCAGCACGGCGGCCTCTTTGATCTGTCCGGCAAAACGGGCCTGGCGTT
TTTGCGCTACCGCCAGGGCCCTGTGGTGGCTGTGTTGGATCCAGGCCATGCCGGCGCTGATCTGCCCTTGCTCACCGGGA
TCCCTCGTCCGGTGCCGGTGGTGGGGTCGGTGGCTGAGGCCATGGTCTATGGCCCCCAGGTGGCGGTGGTGGGCTTGGCG
CCTTCCGGTGGTGTGCTGCCAGAGCCGGTCCGCCAATCGGTGCTGGAGGCGTTGCGCAGCGGCTTGAGTGTGGCCAGTGG
TTTGCACACCCAGCTCGCGGCTGATCCGGAGTTGCAGGCTGCGGTGCAACCGGGCTCCTGGATTTGGGATCTGCGGCAGG
AGCCGGCTGGCCTTGGTGTGGCCGCGGCGCGGGCAGCGTCTTTGCCCTGCCGGCGGATCTTGGCCGTAGGCACCGACATG
TCGGTTGGGAAGATGAGTGCAGCCCTGGAGCTCACCGCTGCTGCACGCCAGCGCGGACTGGATGCCCGCTTTGTTGGCAC
GGGTCAGGCCGGGATTTTGATTGCTGGCGGCGGCGTGCCGCTGGATGCGGTGCGGGTCGATTACGCCGCTGGCGCCGTTG
AGCAGGCCGTGTTGCAGGTGGCTGAGGGGGCTGGTGAGGAGTCGATCGTCTTTGTGGAGGGCCAGGGCTCCTTTTGTCAT
CCAGGCTCCACCGCCACGTTGCCGTTAATGCGCGGCAGCCAGGCCAATAGTTTGCTGTTGGTGCACCGCGCCGGGCAGCG
CAGCATCCGCAACTTGCCGGAGATCGCCTTGCCGCCGCTGCCAGAGCTGATCGCGGTGGTGGAGGCGTTGGCGCGCCTAG
GGCGGCCGCCGGGGCTCGCGCCCGCGCGGGTGAAGGCGATTGCCCTGAACACAGCACAACTGGATGACCGTCAGGCTGCA
GCTGCCATCGAGCAAACAGCCCAAGACACGGGGTGTTGTTGCGCTGATCCTGTGCGTGGTGGAGCTGACCGTCTGCTGGA
AGCGTTGCTCAGCTGA

Upstream 100 bases:

>100_bases
TCGATTCCCATCTCAACTTGGCTGATGACCCCTTCTCTGGCCCGCTGGCCCAGGGGGATCTGCTGCAGCCCAGTAGCGGG
GCTGGTTTGGGGGTGCGGCC

Downstream 100 bases:

>100_bases
CCACGGAGAAGGGCGAGCGAGGGGATTCGAACCCCCGAATAGCGGCGCCACAAGCCGCTGCCTTAACCACTTGGCGACGC
CCGCCGTGGAGACCAGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MLSPDAPVLLLQHGGLFDLSGKTGLAFLRYRQGPVVAVLDPGHAGADLPLLTGIPRPVPVVGSVAEAMVYGPQVAVVGLA
PSGGVLPEPVRQSVLEALRSGLSVASGLHTQLAADPELQAAVQPGSWIWDLRQEPAGLGVAAARAASLPCRRILAVGTDM
SVGKMSAALELTAAARQRGLDARFVGTGQAGILIAGGGVPLDAVRVDYAAGAVEQAVLQVAEGAGEESIVFVEGQGSFCH
PGSTATLPLMRGSQANSLLLVHRAGQRSIRNLPEIALPPLPELIAVVEALARLGRPPGLAPARVKAIALNTAQLDDRQAA
AAIEQTAQDTGCCCADPVRGGADRLLEALLS

Sequences:

>Translated_351_residues
MLSPDAPVLLLQHGGLFDLSGKTGLAFLRYRQGPVVAVLDPGHAGADLPLLTGIPRPVPVVGSVAEAMVYGPQVAVVGLA
PSGGVLPEPVRQSVLEALRSGLSVASGLHTQLAADPELQAAVQPGSWIWDLRQEPAGLGVAAARAASLPCRRILAVGTDM
SVGKMSAALELTAAARQRGLDARFVGTGQAGILIAGGGVPLDAVRVDYAAGAVEQAVLQVAEGAGEESIVFVEGQGSFCH
PGSTATLPLMRGSQANSLLLVHRAGQRSIRNLPEIALPPLPELIAVVEALARLGRPPGLAPARVKAIALNTAQLDDRQAA
AAIEQTAQDTGCCCADPVRGGADRLLEALLS
>Mature_351_residues
MLSPDAPVLLLQHGGLFDLSGKTGLAFLRYRQGPVVAVLDPGHAGADLPLLTGIPRPVPVVGSVAEAMVYGPQVAVVGLA
PSGGVLPEPVRQSVLEALRSGLSVASGLHTQLAADPELQAAVQPGSWIWDLRQEPAGLGVAAARAASLPCRRILAVGTDM
SVGKMSAALELTAAARQRGLDARFVGTGQAGILIAGGGVPLDAVRVDYAAGAVEQAVLQVAEGAGEESIVFVEGQGSFCH
PGSTATLPLMRGSQANSLLLVHRAGQRSIRNLPEIALPPLPELIAVVEALARLGRPPGLAPARVKAIALNTAQLDDRQAA
AAIEQTAQDTGCCCADPVRGGADRLLEALLS

Specific function: Unknown

COG id: COG3367

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35789; Mature: 35789

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPDAPVLLLQHGGLFDLSGKTGLAFLRYRQGPVVAVLDPGHAGADLPLLTGIPRPVPV
CCCCCCCEEEEECCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCCH
VGSVAEAMVYGPQVAVVGLAPSGGVLPEPVRQSVLEALRSGLSVASGLHTQLAADPELQA
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHE
AVQPGSWIWDLRQEPAGLGVAAARAASLPCRRILAVGTDMSVGKMSAALELTAAARQRGL
EECCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
DARFVGTGQAGILIAGGGVPLDAVRVDYAAGAVEQAVLQVAEGAGEESIVFVEGQGSFCH
CEEEEECCCCCEEEECCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEC
PGSTATLPLMRGSQANSLLLVHRAGQRSIRNLPEIALPPLPELIAVVEALARLGRPPGLA
CCCCEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PARVKAIALNTAQLDDRQAAAAIEQTAQDTGCCCADPVRGGADRLLEALLS
CHHEEEEEEECHHCCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MLSPDAPVLLLQHGGLFDLSGKTGLAFLRYRQGPVVAVLDPGHAGADLPLLTGIPRPVPV
CCCCCCCEEEEECCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCCH
VGSVAEAMVYGPQVAVVGLAPSGGVLPEPVRQSVLEALRSGLSVASGLHTQLAADPELQA
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHE
AVQPGSWIWDLRQEPAGLGVAAARAASLPCRRILAVGTDMSVGKMSAALELTAAARQRGL
EECCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
DARFVGTGQAGILIAGGGVPLDAVRVDYAAGAVEQAVLQVAEGAGEESIVFVEGQGSFCH
CEEEEECCCCCEEEECCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEC
PGSTATLPLMRGSQANSLLLVHRAGQRSIRNLPEIALPPLPELIAVVEALARLGRPPGLA
CCCCEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PARVKAIALNTAQLDDRQAAAAIEQTAQDTGCCCADPVRGGADRLLEALLS
CHHEEEEEEECHHCCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA