Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241666

Identifier: 148241666

GI number: 148241666

Start: 501418

End: 502002

Strand: Direct

Name: 148241666

Synonym: SynRCC307_0567

Alternate gene names: NA

Gene position: 501418-502002 (Clockwise)

Preceding gene: 148241664

Following gene: 148241667

Centisome position: 22.54

GC content: 58.46

Gene sequence:

>585_bases
ATGAAGCGAGATGCTGGTTTCTCACTTTTGGAGTTGCTGCTGGCCTGCAGCCTTGGATTGCTGGTGTTTGGCGTCGCTGC
GTCTGCGCTTCTCTCAGAGCAAAAGCTTGGTAGCCGCATGGGCGGGCTCCTCCGGCAGCGACAGCTTCTGTTGCGAGCCA
ATCAACTGATTGCGGCTGATGTGCAGCGCGGCATTGCTCTGGCTCCTGAACTGGTTAGCCCTTGCCACCTGGCTGGCCGC
AAGCGTTGGCTGCAGCTTCTCAACGCCGATGGCTCCATCACCACTTACAGCATTGGCAAAGCTCCCAGTGGCATTTGGCA
AGGGGAGGTTTTGATGCGCTGCGGGCCGGCCTATGGGCTTGATGGCCGTATCAAAGCTGGCGCTCGATCTCTAAACCGAG
TGGTGCTGGATGGTCTGGTTCCGTCTTCGCAGGCATGGGCTGGTTGTTCGTTGCCCCAGGCAGAGACCTTCTCAGAAGCA
CCTGTTTGCTGGGAGCCCGCGAGTGGTGTGGTGCAGTGGCAGCTCCAGCGCACAAGTAATCGAGTGACCACACAACAAGA
TGGACAAGCGCTTCTCAAGGGTTGA

Upstream 100 bases:

>100_bases
CAGTGTGGCTTTTTCTGGCCGGTATCTGTCCTGAGAGCTGGCTGAGAAATCCCTGAGTGTGCTTGCGGGGAATCCTTGGC
ATAACTGGGATGTGGCTTAG

Downstream 100 bases:

>100_bases
TGCGATTGCTGCGTTGCCACTGGATTGGCCCTCTCTTGACCGGTACCTTCCGGCTATTGATGATCATGTGATTAGTGCAT
CGCCTCTTCCCAGTTGCCTT

Product: pili subunit superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKRDAGFSLLELLLACSLGLLVFGVAASALLSEQKLGSRMGGLLRQRQLLLRANQLIAADVQRGIALAPELVSPCHLAGR
KRWLQLLNADGSITTYSIGKAPSGIWQGEVLMRCGPAYGLDGRIKAGARSLNRVVLDGLVPSSQAWAGCSLPQAETFSEA
PVCWEPASGVVQWQLQRTSNRVTTQQDGQALLKG

Sequences:

>Translated_194_residues
MKRDAGFSLLELLLACSLGLLVFGVAASALLSEQKLGSRMGGLLRQRQLLLRANQLIAADVQRGIALAPELVSPCHLAGR
KRWLQLLNADGSITTYSIGKAPSGIWQGEVLMRCGPAYGLDGRIKAGARSLNRVVLDGLVPSSQAWAGCSLPQAETFSEA
PVCWEPASGVVQWQLQRTSNRVTTQQDGQALLKG
>Mature_194_residues
MKRDAGFSLLELLLACSLGLLVFGVAASALLSEQKLGSRMGGLLRQRQLLLRANQLIAADVQRGIALAPELVSPCHLAGR
KRWLQLLNADGSITTYSIGKAPSGIWQGEVLMRCGPAYGLDGRIKAGARSLNRVVLDGLVPSSQAWAGCSLPQAETFSEA
PVCWEPASGVVQWQLQRTSNRVTTQQDGQALLKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20720; Mature: 20720

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDAGFSLLELLLACSLGLLVFGVAASALLSEQKLGSRMGGLLRQRQLLLRANQLIAAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRGIALAPELVSPCHLAGRKRWLQLLNADGSITTYSIGKAPSGIWQGEVLMRCGPAYGL
HHCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCC
DGRIKAGARSLNRVVLDGLVPSSQAWAGCSLPQAETFSEAPVCWEPASGVVQWQLQRTSN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCC
RVTTQQDGQALLKG
CCCCCCCCHHHCCC
>Mature Secondary Structure
MKRDAGFSLLELLLACSLGLLVFGVAASALLSEQKLGSRMGGLLRQRQLLLRANQLIAAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRGIALAPELVSPCHLAGRKRWLQLLNADGSITTYSIGKAPSGIWQGEVLMRCGPAYGL
HHCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCC
DGRIKAGARSLNRVVLDGLVPSSQAWAGCSLPQAETFSEAPVCWEPASGVVQWQLQRTSN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCC
RVTTQQDGQALLKG
CCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA