| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241631
Identifier: 148241631
GI number: 148241631
Start: 472316
End: 472570
Strand: Direct
Name: 148241631
Synonym: SynRCC307_0532
Alternate gene names: NA
Gene position: 472316-472570 (Clockwise)
Preceding gene: 148241629
Following gene: 148241632
Centisome position: 21.23
GC content: 60.39
Gene sequence:
>255_bases TTGGGCGGCAACTCAGCCGGCCTGGCTTCCTCTTGCGTTGGCTCCACAACTCGGATCGTGAGGGATAGCGATGAGGTTTC AGCTGGTGTCCTTTGCTCAGGCGGGGGCTCGGGCTGCGTGTTGGTTGGTGGCTCAGTTTCTTGCTTTGGTTCGGGTCGGA TGTCGGTTGGTGGCTCGGGTTCTTGGTTTGGCTCGGGTGCAGCAAAAGAAGGCTTAACTCCGGTCGCCCCTGGCCATGAG CCGTTCAGCAGGTAG
Upstream 100 bases:
>100_bases ACCAATCAGCCGCTGTGGTTCGGTTTACCCCTTCAAGGATGAAACGCCTTAGGGGGCTTTCTTTTGGACTGCCCGCAGGA GCCGGCGCCATCTCGACTGC
Downstream 100 bases:
>100_bases CCCCGCACCATGGGGCTTGGGTGGGCACTGGTGAGAGCCGCCAACGCCGGTGGTGGCAGTGCATTCCACGGCCCAGCCTT GGCCTTTGAGCGCGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MGGNSAGLASSCVGSTTRIVRDSDEVSAGVLCSGGGSGCVLVGGSVSCFGSGRMSVGGSGSWFGSGAAKEGLTPVAPGHE PFSR
Sequences:
>Translated_84_residues MGGNSAGLASSCVGSTTRIVRDSDEVSAGVLCSGGGSGCVLVGGSVSCFGSGRMSVGGSGSWFGSGAAKEGLTPVAPGHE PFSR >Mature_83_residues GGNSAGLASSCVGSTTRIVRDSDEVSAGVLCSGGGSGCVLVGGSVSCFGSGRMSVGGSGSWFGSGAAKEGLTPVAPGHEP FSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7956; Mature: 7825
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGNSAGLASSCVGSTTRIVRDSDEVSAGVLCSGGGSGCVLVGGSVSCFGSGRMSVGGSG CCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEECCCEEEEECCEEECCCCC SWFGSGAAKEGLTPVAPGHEPFSR CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GGNSAGLASSCVGSTTRIVRDSDEVSAGVLCSGGGSGCVLVGGSVSCFGSGRMSVGGSG CCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEECCCEEEEECCEEECCCCC SWFGSGAAKEGLTPVAPGHEPFSR CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA