Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241628

Identifier: 148241628

GI number: 148241628

Start: 470918

End: 471406

Strand: Direct

Name: 148241628

Synonym: SynRCC307_0529

Alternate gene names: NA

Gene position: 470918-471406 (Clockwise)

Preceding gene: 148241627

Following gene: 148241629

Centisome position: 21.17

GC content: 54.81

Gene sequence:

>489_bases
GTGAATCAGCGCAGGTTTTTCCTCAAAGATCTGAACTGTTTGGCCCCAATGATCAAGGCAGGGGCTGGTTTGCTGGCTTG
CTCAGTTGGGCTTTTGACATCAACGCCTGCGCAGGCCACCAGCCTTCACCCCTGCGGCAGTATTCGGATTGCTAACACCA
CCTTCTGCTTTCTTGATGCCAATGGCGATGGGCGGTACCAAGAGGGTGAGGAGGAGTTTTGCCTTGATGGTTGGCTGACC
CGCGGAGGACTTCGTTGCCGCGGTGAAGGGGTCAAGGCAACGCCCGGTTCTCAAGCCTCAGTAATCACGATTCGCGTGCT
CACCAGTTGGGATGAATCGTGTCCTGGCTCCATGAGTGTTGATCAAATTAACCATCACTTGCGCAATGGCTACCGCATCG
TGGGGACGAAGACCCAGACCGAGATGATCTCGACCACTGGCCAACCCATCGCCTGTTCGTATACGACCTATTCACTCCAA
CAACGTTGA

Upstream 100 bases:

>100_bases
CAGCAGTGCGCCGGCGTGTGGAGTCCATGGCTGCTGAGGAGAACCGACCATCCATCGACCTGAGCTTCTATCAACAGGCC
AAAGCCAGCATGGGGCCGAA

Downstream 100 bases:

>100_bases
TGGTCTGCTGCTGCACAGTGGATTGAGTCCATGGGCAAAGCGCTAATGAGGCCTCTTGTGATTGCTTTCACCACGGTTCT
CAGCGCAGCACCGGCTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDANGDGRYQEGEEEFCLDGWLT
RGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSVDQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQ
QR

Sequences:

>Translated_162_residues
MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDANGDGRYQEGEEEFCLDGWLT
RGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSVDQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQ
QR
>Mature_162_residues
MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDANGDGRYQEGEEEFCLDGWLT
RGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSVDQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQ
QR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17598; Mature: 17598

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDA
CCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEC
NGDGRYQEGEEEFCLDGWLTRGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSV
CCCCCCCCCCCCEEEHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCH
DQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQQR
HHHHHHHHCCEEEEECCCHHHHHHCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDA
CCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEC
NGDGRYQEGEEEFCLDGWLTRGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSV
CCCCCCCCCCCCEEEHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCH
DQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQQR
HHHHHHHHCCEEEEECCCHHHHHHCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA