| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241628
Identifier: 148241628
GI number: 148241628
Start: 470918
End: 471406
Strand: Direct
Name: 148241628
Synonym: SynRCC307_0529
Alternate gene names: NA
Gene position: 470918-471406 (Clockwise)
Preceding gene: 148241627
Following gene: 148241629
Centisome position: 21.17
GC content: 54.81
Gene sequence:
>489_bases GTGAATCAGCGCAGGTTTTTCCTCAAAGATCTGAACTGTTTGGCCCCAATGATCAAGGCAGGGGCTGGTTTGCTGGCTTG CTCAGTTGGGCTTTTGACATCAACGCCTGCGCAGGCCACCAGCCTTCACCCCTGCGGCAGTATTCGGATTGCTAACACCA CCTTCTGCTTTCTTGATGCCAATGGCGATGGGCGGTACCAAGAGGGTGAGGAGGAGTTTTGCCTTGATGGTTGGCTGACC CGCGGAGGACTTCGTTGCCGCGGTGAAGGGGTCAAGGCAACGCCCGGTTCTCAAGCCTCAGTAATCACGATTCGCGTGCT CACCAGTTGGGATGAATCGTGTCCTGGCTCCATGAGTGTTGATCAAATTAACCATCACTTGCGCAATGGCTACCGCATCG TGGGGACGAAGACCCAGACCGAGATGATCTCGACCACTGGCCAACCCATCGCCTGTTCGTATACGACCTATTCACTCCAA CAACGTTGA
Upstream 100 bases:
>100_bases CAGCAGTGCGCCGGCGTGTGGAGTCCATGGCTGCTGAGGAGAACCGACCATCCATCGACCTGAGCTTCTATCAACAGGCC AAAGCCAGCATGGGGCCGAA
Downstream 100 bases:
>100_bases TGGTCTGCTGCTGCACAGTGGATTGAGTCCATGGGCAAAGCGCTAATGAGGCCTCTTGTGATTGCTTTCACCACGGTTCT CAGCGCAGCACCGGCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDANGDGRYQEGEEEFCLDGWLT RGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSVDQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQ QR
Sequences:
>Translated_162_residues MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDANGDGRYQEGEEEFCLDGWLT RGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSVDQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQ QR >Mature_162_residues MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDANGDGRYQEGEEEFCLDGWLT RGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSVDQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQ QR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17598; Mature: 17598
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDA CCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEC NGDGRYQEGEEEFCLDGWLTRGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSV CCCCCCCCCCCCEEEHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCH DQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQQR HHHHHHHHCCEEEEECCCHHHHHHCCCCCEEEEEEEEEECCC >Mature Secondary Structure MNQRRFFLKDLNCLAPMIKAGAGLLACSVGLLTSTPAQATSLHPCGSIRIANTTFCFLDA CCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEC NGDGRYQEGEEEFCLDGWLTRGGLRCRGEGVKATPGSQASVITIRVLTSWDESCPGSMSV CCCCCCCCCCCCEEEHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCH DQINHHLRNGYRIVGTKTQTEMISTTGQPIACSYTTYSLQQR HHHHHHHHCCEEEEECCCHHHHHHCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA