| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241615
Identifier: 148241615
GI number: 148241615
Start: 465067
End: 465327
Strand: Direct
Name: 148241615
Synonym: SynRCC307_0516
Alternate gene names: NA
Gene position: 465067-465327 (Clockwise)
Preceding gene: 148241614
Following gene: 148241616
Centisome position: 20.9
GC content: 57.47
Gene sequence:
>261_bases ATGAACAACGTTTCTCCCTCGGCTGCGGAGGCCATTGCTGGTGCCCTGTTCGCCAAATCCATTGACGATTGCCTCGAGGG CTTGAACGATGCCGAGCGCTTCAAGGCATCGATGGCTTTGAAGCAGGTCTATATGTCTGAGCAGACCCGCTCACGCCTCA ACCAAGCCGTGCAAGAAGTCAACGAGCTGGCGCTCAGCCGCGCGGCGGTGTTCATCGATGGCTTGTTGGATGGCGACAAG GAAGAGATCACACCGCTGTAG
Upstream 100 bases:
>100_bases CTATGACCTGGCGGAAGGCAGTGCGGCAATCCTGATCGATGAATTGCTGGACGGCCCCACCACCCCTTGACGGTGGTACA GAAGTACGCATCATGCGGAG
Downstream 100 bases:
>100_bases CGATCTGAGCGAGTCAAATTCAGTCATCCGTCCTCCAGATCCATTCAGAACTGGGTCATGGGCTGGTGGGAGCGTCGGAT GTCTTGATTGGGGATCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MNNVSPSAAEAIAGALFAKSIDDCLEGLNDAERFKASMALKQVYMSEQTRSRLNQAVQEVNELALSRAAVFIDGLLDGDK EEITPL
Sequences:
>Translated_86_residues MNNVSPSAAEAIAGALFAKSIDDCLEGLNDAERFKASMALKQVYMSEQTRSRLNQAVQEVNELALSRAAVFIDGLLDGDK EEITPL >Mature_86_residues MNNVSPSAAEAIAGALFAKSIDDCLEGLNDAERFKASMALKQVYMSEQTRSRLNQAVQEVNELALSRAAVFIDGLLDGDK EEITPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9302; Mature: 9302
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVSPSAAEAIAGALFAKSIDDCLEGLNDAERFKASMALKQVYMSEQTRSRLNQAVQEV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELALSRAAVFIDGLLDGDKEEITPL HHHHHHHHHHHHHHHHCCCHHCCCCC >Mature Secondary Structure MNNVSPSAAEAIAGALFAKSIDDCLEGLNDAERFKASMALKQVYMSEQTRSRLNQAVQEV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELALSRAAVFIDGLLDGDKEEITPL HHHHHHHHHHHHHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA