| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is gluQ [H]
Identifier: 148241581
GI number: 148241581
Start: 448027
End: 448902
Strand: Direct
Name: gluQ [H]
Synonym: SynRCC307_0482
Alternate gene names: 148241581
Gene position: 448027-448902 (Clockwise)
Preceding gene: 148241580
Following gene: 148241582
Centisome position: 20.14
GC content: 63.7
Gene sequence:
>876_bases TTGCATCTGGGCAACCTGCGCACGGCCTTGCTGTCGTGGTTATCAGCTCGGCTGACTGGAGCCGAATGGCTCTTGCGCAT CGATGATCTCGATACCCCCCGCAACCGGCCTGGGGCAGAGGCGCAGACGATCGCTGATTTGCAGTGGTTGGGCTTGCTTT GGGATGGCCCTGTGATTCGCCAGAGCGAGCGGCGCGGGCTGTATCACTCGTTGCTGTCGGCTCTTAGGAGCCAAGGCTGC TTGTACCCCTGCCATTGCAGCCGGCGCATGTTGGCTGATGTGTCAGCGCCCCACGGTGCTTGGCCCTTGTATCCAGGAAC CTGCCGCGGCCTTGCCCCTGATTGGGGTGCCCGCAAGGGGCGACTGCCCAGCTGGCGTTTGCGGCTTCCGGCAGGCCGTT TGCACTGGCCTGAACAAGGCCAGGTGAGCAGCAGCAACTTGGATGGGCTCAGTGAGGTTGGTGATGTGGTGCTGCGGCGC GCTGATGGCTTTTTGGCGTATCACCTGGCCACGGCAGTCGATGAGCTTTGGCTGGGCATCACCGATGTGGTCCGTGGTGA CGACCTGTGGGTCACGACCGGGCCGCAAGTGGCGCTGATGCAGCTGCTGGGTTGCGCGCCTCCGAGCTACTGGCATGTGC CGTTGCTGCTTGATAAGGCCGGCCAGCGGCTGGCCAAACGCGATGGATCAGAAGGCCTGGAGCGGTGGCGTTGCCTTGGG GGTCGCGCGGAGGGGCTCATTGGTCAATGGGCTGCCCAGCTGGGCTGGCTCCCTGCGGGCGCTGAGCTCAGTGCAGAGGA GTTGCTGGCTGAGCTGAAGTGCCGCAACTCCATGCCGATCACCCCGGAAGGGAGTCGGTTGATACCAAAGCAGTAA
Upstream 100 bases:
>100_bases CGAAGCGCTTCCTGCCCACCTGCAGGAGGCGCTTTTTAATGCTCAGCAGCGCCGCAGGCTTCATCGGCGCGCTCGCTTCG CGCCCACCCCCAGTGGGCCT
Downstream 100 bases:
>100_bases TTGTGCTCACTTCCGCCGCATTTCTTAAGGAAGTGTTCGGGATCATTGGGCCCGGAATTATTCACACTGGAATCAATAAG ACTCGTGTCCCCATGGGCTC
Product: glutamyl-tRNA synthetase-related protein
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MHLGNLRTALLSWLSARLTGAEWLLRIDDLDTPRNRPGAEAQTIADLQWLGLLWDGPVIRQSERRGLYHSLLSALRSQGC LYPCHCSRRMLADVSAPHGAWPLYPGTCRGLAPDWGARKGRLPSWRLRLPAGRLHWPEQGQVSSSNLDGLSEVGDVVLRR ADGFLAYHLATAVDELWLGITDVVRGDDLWVTTGPQVALMQLLGCAPPSYWHVPLLLDKAGQRLAKRDGSEGLERWRCLG GRAEGLIGQWAAQLGWLPAGAELSAEELLAELKCRNSMPITPEGSRLIPKQ
Sequences:
>Translated_291_residues MHLGNLRTALLSWLSARLTGAEWLLRIDDLDTPRNRPGAEAQTIADLQWLGLLWDGPVIRQSERRGLYHSLLSALRSQGC LYPCHCSRRMLADVSAPHGAWPLYPGTCRGLAPDWGARKGRLPSWRLRLPAGRLHWPEQGQVSSSNLDGLSEVGDVVLRR ADGFLAYHLATAVDELWLGITDVVRGDDLWVTTGPQVALMQLLGCAPPSYWHVPLLLDKAGQRLAKRDGSEGLERWRCLG GRAEGLIGQWAAQLGWLPAGAELSAEELLAELKCRNSMPITPEGSRLIPKQ >Mature_291_residues MHLGNLRTALLSWLSARLTGAEWLLRIDDLDTPRNRPGAEAQTIADLQWLGLLWDGPVIRQSERRGLYHSLLSALRSQGC LYPCHCSRRMLADVSAPHGAWPLYPGTCRGLAPDWGARKGRLPSWRLRLPAGRLHWPEQGQVSSSNLDGLSEVGDVVLRR ADGFLAYHLATAVDELWLGITDVVRGDDLWVTTGPQVALMQLLGCAPPSYWHVPLLLDKAGQRLAKRDGSEGLERWRCLG GRAEGLIGQWAAQLGWLPAGAELSAEELLAELKCRNSMPITPEGSRLIPKQ
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=313, Percent_Identity=33.2268370607029, Blast_Score=132, Evalue=5e-31, Organism=Escherichia coli, GI226510925, Length=237, Percent_Identity=35.4430379746835, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1788743, Length=284, Percent_Identity=29.9295774647887, Blast_Score=130, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71993394, Length=276, Percent_Identity=26.8115942028986, Blast_Score=115, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6324540, Length=273, Percent_Identity=32.6007326007326, Blast_Score=133, Evalue=4e-32, Organism=Drosophila melanogaster, GI24665321, Length=268, Percent_Identity=33.2089552238806, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 32118; Mature: 32118
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLGNLRTALLSWLSARLTGAEWLLRIDDLDTPRNRPGAEAQTIADLQWLGLLWDGPVIR CCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHC QSERRGLYHSLLSALRSQGCLYPCHCSRRMLADVSAPHGAWPLYPGTCRGLAPDWGARKG CHHHCCHHHHHHHHHHHCCCEEEHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RLPSWRLRLPAGRLHWPEQGQVSSSNLDGLSEVGDVVLRRADGFLAYHLATAVDELWLGI CCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TDVVRGDDLWVTTGPQVALMQLLGCAPPSYWHVPLLLDKAGQRLAKRDGSEGLERWRCLG HHHHCCCCEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHC GRAEGLIGQWAAQLGWLPAGAELSAEELLAELKCRNSMPITPEGSRLIPKQ CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHLGNLRTALLSWLSARLTGAEWLLRIDDLDTPRNRPGAEAQTIADLQWLGLLWDGPVIR CCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHC QSERRGLYHSLLSALRSQGCLYPCHCSRRMLADVSAPHGAWPLYPGTCRGLAPDWGARKG CHHHCCHHHHHHHHHHHCCCEEEHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RLPSWRLRLPAGRLHWPEQGQVSSSNLDGLSEVGDVVLRRADGFLAYHLATAVDELWLGI CCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TDVVRGDDLWVTTGPQVALMQLLGCAPPSYWHVPLLLDKAGQRLAKRDGSEGLERWRCLG HHHHCCCCEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHC GRAEGLIGQWAAQLGWLPAGAELSAEELLAELKCRNSMPITPEGSRLIPKQ CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA