| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241563
Identifier: 148241563
GI number: 148241563
Start: 434634
End: 435101
Strand: Direct
Name: 148241563
Synonym: SynRCC307_0464
Alternate gene names: NA
Gene position: 434634-435101 (Clockwise)
Preceding gene: 148241562
Following gene: 148241565
Centisome position: 19.53
GC content: 66.24
Gene sequence:
>468_bases ATGCCAATGAAGGACGTGAGCGATCTTTGGCCCATCAGCCGCGCTCTGTTGATGCAGATCCTGGAGGATCGCTGTAGTGA TCAATTCGTTTGCGAGCGGATCTGGGAGCGCCTGGGGTATGCGCCCAGTTCGCAGGACTGGACGGCTGGGGACAACACCC CAGCGCCGTGGGCCGACGCCTTCCCCCAGGCGCCCCAGGTGATTGCGGAGCGCCCGGCATCGGTGCGCCTGACCCGCTCC ATCGCCAAGGAGCACAAGCAACTGCTGAAGCAGCAGCTGCAGTTCGCCGGCTACCGCATTGGTGAGCTCTACCCGCGCCG CACGCGCCGTGCCACGGCAGTGAATTGGCTGTTGGCCTGGCTGGCTGAGCGCGCTGAGCCGCTAGAGGAACAGGGCCCCC TGGCGCCGGAGTTGCCGGTACCAGAGGACCCTGTGACCGGTCATCCCGGCGATCGCGCTGTGGCCTGA
Upstream 100 bases:
>100_bases GCGTGAAAGCGAGCTGTTTCAACAGGCTTGCTTTGTGAATGCCACCTCGCCATTGCCGGCGGTGCCGTTGCCCTGAACGG GGGTCAAGCTGATCGTTGCG
Downstream 100 bases:
>100_bases TTCGCCGCGGCGCTCAGGTCTGAATCGTGATGGGGGTGCCGGTTTTGGTGCGGTGGAACAGCCACTTAGCCTGAACCGTT GGCATGCGCACGCAACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPMKDVSDLWPISRALLMQILEDRCSDQFVCERIWERLGYAPSSQDWTAGDNTPAPWADAFPQAPQVIAERPASVRLTRS IAKEHKQLLKQQLQFAGYRIGELYPRRTRRATAVNWLLAWLAERAEPLEEQGPLAPELPVPEDPVTGHPGDRAVA
Sequences:
>Translated_155_residues MPMKDVSDLWPISRALLMQILEDRCSDQFVCERIWERLGYAPSSQDWTAGDNTPAPWADAFPQAPQVIAERPASVRLTRS IAKEHKQLLKQQLQFAGYRIGELYPRRTRRATAVNWLLAWLAERAEPLEEQGPLAPELPVPEDPVTGHPGDRAVA >Mature_154_residues PMKDVSDLWPISRALLMQILEDRCSDQFVCERIWERLGYAPSSQDWTAGDNTPAPWADAFPQAPQVIAERPASVRLTRSI AKEHKQLLKQQLQFAGYRIGELYPRRTRRATAVNWLLAWLAERAEPLEEQGPLAPELPVPEDPVTGHPGDRAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17537; Mature: 17406
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKDVSDLWPISRALLMQILEDRCSDQFVCERIWERLGYAPSSQDWTAGDNTPAPWADA CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHC FPQAPQVIAERPASVRLTRSIAKEHKQLLKQQLQFAGYRIGELYPRRTRRATAVNWLLAW CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LAERAEPLEEQGPLAPELPVPEDPVTGHPGDRAVA HHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PMKDVSDLWPISRALLMQILEDRCSDQFVCERIWERLGYAPSSQDWTAGDNTPAPWADA CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHC FPQAPQVIAERPASVRLTRSIAKEHKQLLKQQLQFAGYRIGELYPRRTRRATAVNWLLAW CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LAERAEPLEEQGPLAPELPVPEDPVTGHPGDRAVA HHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA