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The map label for this gene is degQ [C]

Identifier: 148241474

GI number: 148241474

Start: 359975

End: 361066

Strand: Direct

Name: degQ [C]

Synonym: SynRCC307_0375

Alternate gene names: 148241474

Gene position: 359975-361066 (Clockwise)

Preceding gene: 148241471

Following gene: 148241475

Centisome position: 16.18

GC content: 64.38

Gene sequence:

>1092_bases
ATGCGCCGCCAGTTGCCGCTGCTTGCCCTCTCCACGGCTTTGGTGATCGGAACAGCAGCTCAGGCGCCAGCCCGTTTGCC
CGTTTCAACCACCAATCGCCAGTCCTTTGTGGCAGAGGCTGTACGTCAAGCCGGGCCCGCGGTGGTGCGCATCGACACCG
AGCGCACCATCACCAGCGCCAGCGCACCAGGCGGAATTCCGCCGGTGTTCTTGATGGATCCGTTGTTTCGTCAGTTCTTT
GGTGGCTCCGGTGGCGCCATGCCCGCGCCGCGGCCAAGCCAACGCACTGAACGCGGTCAGGGCACGGGGGTGATCTTTGA
GGCTGATGGCTTAATCCTCACCAATGCCCATGTGGTCGAGGGGGCCTCAAGGGTCACGGTGGGTCTGGTGGATGGCCGCA
CGATGGAAGGCTCGGTCATCGGGGCTGATCCCGTCACCGATCTGGCAGTTGTTCGCGTGGCCGCTTCAGAGCCTCTGCCT
GTGGCGCCATTGGGCGATTCCGATGCGGTGGAGGTGGGGGACTGGGCCATCGCGGTGGGGAACCCATTTGGTCTGGACAA
CACCGTCACCTTGGGGATCATCAGCAGCACCAACCGCAACGCCACCAAGCTCGGGATCACCGACAAGCGCCTTGATTTGA
TTCAGACCGATGCCGCGATCAATCCCGGGAATTCCGGCGGGCCGCTGCTGAATGCCGATGGTGAGGTGGTGGGGATTAAT
GCCTTGGTGCGCACTGGCCCTGGCGCCGGCTTGGGCTTCTCGATTCCGATCAACCGGGCGCGATCGATTGCCGATCAGCT
GATCCGCAATGGCAAAGCCAGCCATGCTCTGGTTGGTCTGGCTCTCTCCGCTGAGCCCAAGGGGGTGCGGGTGAACTCCG
TGATGCCCAATGGCCCAGCCGCTCGCGCGGGGGTGCGGCCCGGCGATCTGGTGCTGAGCGTTGGCGGCGAAGCAGTGCGC
GATCCGGCGCAATTCCTGGCTCGTATGGAGCGCTCAGGGGTTGGCAAGCCCCTCAGCCTTGAGCTGCTGCGTGATGGTCA
GCGCCGCACTCTGGAGGTGGTGCCGGTGGAGATGGCCAGCATGGCCACTTGA

Upstream 100 bases:

>100_bases
AGCCCGGTCACTGGCACAACCAGTCACATCTTGGTGCGTTGCCAGAGGGGCCTGAGCGGTCAACCGTCGATACGGTTTGA
CGAGTCTTTTGCCCCGATTC

Downstream 100 bases:

>100_bases
CCCAGAGTCCATAGGCCGGCGTGATCGCTGTCCGTTTGTCAAGGCCCCCAGTTCAATTCGTCTCACAATGAGACCAATCG
ATTCCACGTTTGTGGCAAGG

Product: periplasmic trypsin-like serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRRQLPLLALSTALVIGTAAQAPARLPVSTTNRQSFVAEAVRQAGPAVVRIDTERTITSASAPGGIPPVFLMDPLFRQFF
GGSGGAMPAPRPSQRTERGQGTGVIFEADGLILTNAHVVEGASRVTVGLVDGRTMEGSVIGADPVTDLAVVRVAASEPLP
VAPLGDSDAVEVGDWAIAVGNPFGLDNTVTLGIISSTNRNATKLGITDKRLDLIQTDAAINPGNSGGPLLNADGEVVGIN
ALVRTGPGAGLGFSIPINRARSIADQLIRNGKASHALVGLALSAEPKGVRVNSVMPNGPAARAGVRPGDLVLSVGGEAVR
DPAQFLARMERSGVGKPLSLELLRDGQRRTLEVVPVEMASMAT

Sequences:

>Translated_363_residues
MRRQLPLLALSTALVIGTAAQAPARLPVSTTNRQSFVAEAVRQAGPAVVRIDTERTITSASAPGGIPPVFLMDPLFRQFF
GGSGGAMPAPRPSQRTERGQGTGVIFEADGLILTNAHVVEGASRVTVGLVDGRTMEGSVIGADPVTDLAVVRVAASEPLP
VAPLGDSDAVEVGDWAIAVGNPFGLDNTVTLGIISSTNRNATKLGITDKRLDLIQTDAAINPGNSGGPLLNADGEVVGIN
ALVRTGPGAGLGFSIPINRARSIADQLIRNGKASHALVGLALSAEPKGVRVNSVMPNGPAARAGVRPGDLVLSVGGEAVR
DPAQFLARMERSGVGKPLSLELLRDGQRRTLEVVPVEMASMAT
>Mature_363_residues
MRRQLPLLALSTALVIGTAAQAPARLPVSTTNRQSFVAEAVRQAGPAVVRIDTERTITSASAPGGIPPVFLMDPLFRQFF
GGSGGAMPAPRPSQRTERGQGTGVIFEADGLILTNAHVVEGASRVTVGLVDGRTMEGSVIGADPVTDLAVVRVAASEPLP
VAPLGDSDAVEVGDWAIAVGNPFGLDNTVTLGIISSTNRNATKLGITDKRLDLIQTDAAINPGNSGGPLLNADGEVVGIN
ALVRTGPGAGLGFSIPINRARSIADQLIRNGKASHALVGLALSAEPKGVRVNSVMPNGPAARAGVRPGDLVLSVGGEAVR
DPAQFLARMERSGVGKPLSLELLRDGQRRTLEVVPVEMASMAT

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI7019477, Length=283, Percent_Identity=38.5159010600707, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI22129776, Length=347, Percent_Identity=33.1412103746398, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI4506141, Length=316, Percent_Identity=33.2278481012658, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI24308541, Length=278, Percent_Identity=34.8920863309352, Blast_Score=147, Evalue=1e-35,
Organism=Escherichia coli, GI1789629, Length=373, Percent_Identity=36.9973190348526, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1786356, Length=363, Percent_Identity=33.6088154269972, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI1789630, Length=284, Percent_Identity=36.6197183098592, Blast_Score=167, Evalue=8e-43,
Organism=Drosophila melanogaster, GI24646839, Length=285, Percent_Identity=33.3333333333333, Blast_Score=148, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 37304; Mature: 37304

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQLPLLALSTALVIGTAAQAPARLPVSTTNRQSFVAEAVRQAGPAVVRIDTERTITSA
CCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEECC
SAPGGIPPVFLMDPLFRQFFGGSGGAMPAPRPSQRTERGQGTGVIFEADGLILTNAHVVE
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEEECCCEEC
GASRVTVGLVDGRTMEGSVIGADPVTDLAVVRVAASEPLPVAPLGDSDAVEVGDWAIAVG
CCCEEEEEEECCCEECCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEEEEC
NPFGLDNTVTLGIISSTNRNATKLGITDKRLDLIQTDAAINPGNSGGPLLNADGEVVGIN
CCCCCCCEEEEEEEECCCCCCEEECCCHHHHHEEEECCCCCCCCCCCCEECCCCCEEEEE
ALVRTGPGAGLGFSIPINRARSIADQLIRNGKASHALVGLALSAEPKGVRVNSVMPNGPA
EEEECCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCC
ARAGVRPGDLVLSVGGEAVRDPAQFLARMERSGVGKPLSLELLRDGQRRTLEVVPVEMAS
CCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHCCCCCEEHHEECCCCCCEEEEEEEHHHH
MAT
CCC
>Mature Secondary Structure
MRRQLPLLALSTALVIGTAAQAPARLPVSTTNRQSFVAEAVRQAGPAVVRIDTERTITSA
CCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEECC
SAPGGIPPVFLMDPLFRQFFGGSGGAMPAPRPSQRTERGQGTGVIFEADGLILTNAHVVE
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEEECCCEEC
GASRVTVGLVDGRTMEGSVIGADPVTDLAVVRVAASEPLPVAPLGDSDAVEVGDWAIAVG
CCCEEEEEEECCCEECCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEEEEC
NPFGLDNTVTLGIISSTNRNATKLGITDKRLDLIQTDAAINPGNSGGPLLNADGEVVGIN
CCCCCCCEEEEEEEECCCCCCEEECCCHHHHHEEEECCCCCCCCCCCCEECCCCCEEEEE
ALVRTGPGAGLGFSIPINRARSIADQLIRNGKASHALVGLALSAEPKGVRVNSVMPNGPA
EEEECCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCC
ARAGVRPGDLVLSVGGEAVRDPAQFLARMERSGVGKPLSLELLRDGQRRTLEVVPVEMAS
CCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHCCCCCEEHHEECCCCCCEEEEEEEHHHH
MAT
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA