| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241389
Identifier: 148241389
GI number: 148241389
Start: 288293
End: 288571
Strand: Direct
Name: 148241389
Synonym: SynRCC307_0290
Alternate gene names: NA
Gene position: 288293-288571 (Clockwise)
Preceding gene: 148241385
Following gene: 148241391
Centisome position: 12.96
GC content: 62.72
Gene sequence:
>279_bases ATGAGCCCCAGCAGGCTGGTGGCCATGTCTGATCCCCTCATCCGTGAGCTTGATCATTACGTGGTGCTGGATCCAGCCGT GGGCGAACAAATCCTCAGCGCGGCCGAAACCCGTCACTGGTTGGCGGAGCAGCTCCAACGCCTCAAGCAATTGCCGGCCG ACATCGCTGCTGTCGAGGGTCTGCCCCAGCAGGTGGAATGGCTCATCGACACGGCCTGTGCGCTGGAAATCGAGCCAGGG CTCACGGTGCAGTGGTTTGCGGTGCGCCTGGAGCCTTGA
Upstream 100 bases:
>100_bases TGGACGCGGCAATGGAGCCGGTAGTTGCCAGCTGGGCCATTGCTCCAGCCGCAGGTTCAAGGGGCCGGCCGCAGCACTGA TGGGCAGCAGCAGCGCCAAG
Downstream 100 bases:
>100_bases GCAATCCAGGCAGCTGCTGAAGAATTCGCTCGCTGATGTCGCTGGCGCCCTCTCCTTGCGCGCTCACGCGGAGATCGGCT TGCCCATAGAGGGGTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSPSRLVAMSDPLIRELDHYVVLDPAVGEQILSAAETRHWLAEQLQRLKQLPADIAAVEGLPQQVEWLIDTACALEIEPG LTVQWFAVRLEP
Sequences:
>Translated_92_residues MSPSRLVAMSDPLIRELDHYVVLDPAVGEQILSAAETRHWLAEQLQRLKQLPADIAAVEGLPQQVEWLIDTACALEIEPG LTVQWFAVRLEP >Mature_91_residues SPSRLVAMSDPLIRELDHYVVLDPAVGEQILSAAETRHWLAEQLQRLKQLPADIAAVEGLPQQVEWLIDTACALEIEPGL TVQWFAVRLEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10298; Mature: 10167
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSRLVAMSDPLIRELDHYVVLDPAVGEQILSAAETRHWLAEQLQRLKQLPADIAAVEG CCCCCEEEECCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC LPQQVEWLIDTACALEIEPGLTVQWFAVRLEP CHHHHHHHHHHHHEEEECCCCEEEEEEEEECC >Mature Secondary Structure SPSRLVAMSDPLIRELDHYVVLDPAVGEQILSAAETRHWLAEQLQRLKQLPADIAAVEG CCCCEEEECCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC LPQQVEWLIDTACALEIEPGLTVQWFAVRLEP CHHHHHHHHHHHHEEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA