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The map label for this gene is kpsF [C]

Identifier: 148241383

GI number: 148241383

Start: 283728

End: 284753

Strand: Direct

Name: kpsF [C]

Synonym: SynRCC307_0284

Alternate gene names: 148241383

Gene position: 283728-284753 (Clockwise)

Preceding gene: 148241382

Following gene: 148241384

Centisome position: 12.75

GC content: 64.23

Gene sequence:

>1026_bases
ATGAATCCCCTGGCCCCGGTGTTGCAGCAGGAAGCCCAGGCGTTGTTGAACACGGCCGCTCAATTGCGGCCCGATCAAGC
CGAGGCCGCCTTGGATCTGCTGCAGCACTGCAGCGAGCAGGGCGCCAAGTTGGTCGTCACGGGTGTGGGCAAAAGCGGGA
TCGTGGCTCGCAAGATCGCGGCCACGTTCACCTCGATTGGCCTGATGGCCCTCTATCTCAATCCCCTCGATGCACTGCAT
GGGGATCTGGGGGTTGTGGGGGCCGAAGACGTTGTTCTGCTGCTCTCCAACAGCGGCGAGAGCAGTGAGTTGCTGGCGTT
GCTGCCCCATTTGCACCGCCGCGGTAGCGCTTGCATTGCTCTGACGGGCCGGCTGGATTCCAGCTTGGCCAGGGGCGCTC
AAGTGGTGCTCGATGGCTCCGTGGATCGTGAGGTGTGCCCCCTCAACCTGGCTCCAACAGCCAGCACAGCAGTGGCGATG
GCGATTGGGGATGCCTTGGCGGCGGTGTGGATGCAGCGGCAGGGCATCACCCAGGCCGATTTTGCGGTGAATCACCCCGC
AGGTTCCTTGGGGCGGCAGCTCACCCTCAGCGTCGCGGATTTGATGGTCCCCATCGACACGTGCCCGCCCTTGCCGCCGG
ATGCTGCATTGCCAGAAGTGGTGGACCAGCTCACCGGCGCTCTGGCTGGGGCCGCGTGGGTGCAGCAGCCTGATCAGCCC
AAGCGGTTGTTGGGCTTGATCACCGATGGCGACCTGCGCCGCGCGCTGCGAACCCATTCGCCCCAGGCCTGGGCTTCGAT
TCAGGCGGCCGATTTGATGACCACTGATCCCATCACGGCAGCCCCTGATCAATTGGCCGTTGCCGCTTTGGAGCTGATGG
AGCGCAACCGCCGTAAGTCGATTTCGGTGTTGCCTGTGCAGGCGGTCAGTGGGGAGTTGGTGGGGCTGCTGCGCTTGCAT
GATCTGGTGCAGGCCGGGCTGAGCCGCGCTTCAGGAACCACAACAGACATTCCGCAGGCGGCATGA

Upstream 100 bases:

>100_bases
TTGAGGCCATGCCGGTGGGGTGAGGCGCGCTTGGGCTCGCTGATCACATCGAAATAGCCTCCGGGCATCTTAATTTCGTG
TCTTATTTGCTGGGCCTGCG

Downstream 100 bases:

>100_bases
GCATCCCGTTCACCTTGATTGCTGGGCCCTGTGTGCTCGAAAGCCCTGAGCTGGTTTTTGACATGGCCGCCGCACTCAAG
GCCATGAGCGAGCGGCTCGG

Product: polysialic acid capsule expression protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNPLAPVLQQEAQALLNTAAQLRPDQAEAALDLLQHCSEQGAKLVVTGVGKSGIVARKIAATFTSIGLMALYLNPLDALH
GDLGVVGAEDVVLLLSNSGESSELLALLPHLHRRGSACIALTGRLDSSLARGAQVVLDGSVDREVCPLNLAPTASTAVAM
AIGDALAAVWMQRQGITQADFAVNHPAGSLGRQLTLSVADLMVPIDTCPPLPPDAALPEVVDQLTGALAGAAWVQQPDQP
KRLLGLITDGDLRRALRTHSPQAWASIQAADLMTTDPITAAPDQLAVAALELMERNRRKSISVLPVQAVSGELVGLLRLH
DLVQAGLSRASGTTTDIPQAA

Sequences:

>Translated_341_residues
MNPLAPVLQQEAQALLNTAAQLRPDQAEAALDLLQHCSEQGAKLVVTGVGKSGIVARKIAATFTSIGLMALYLNPLDALH
GDLGVVGAEDVVLLLSNSGESSELLALLPHLHRRGSACIALTGRLDSSLARGAQVVLDGSVDREVCPLNLAPTASTAVAM
AIGDALAAVWMQRQGITQADFAVNHPAGSLGRQLTLSVADLMVPIDTCPPLPPDAALPEVVDQLTGALAGAAWVQQPDQP
KRLLGLITDGDLRRALRTHSPQAWASIQAADLMTTDPITAAPDQLAVAALELMERNRRKSISVLPVQAVSGELVGLLRLH
DLVQAGLSRASGTTTDIPQAA
>Mature_341_residues
MNPLAPVLQQEAQALLNTAAQLRPDQAEAALDLLQHCSEQGAKLVVTGVGKSGIVARKIAATFTSIGLMALYLNPLDALH
GDLGVVGAEDVVLLLSNSGESSELLALLPHLHRRGSACIALTGRLDSSLARGAQVVLDGSVDREVCPLNLAPTASTAVAM
AIGDALAAVWMQRQGITQADFAVNHPAGSLGRQLTLSVADLMVPIDTCPPLPPDAALPEVVDQLTGALAGAAWVQQPDQP
KRLLGLITDGDLRRALRTHSPQAWASIQAADLMTTDPITAAPDQLAVAALELMERNRRKSISVLPVQAVSGELVGLLRLH
DLVQAGLSRASGTTTDIPQAA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=286, Percent_Identity=43.3566433566434, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI87082151, Length=304, Percent_Identity=38.1578947368421, Blast_Score=182, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35475; Mature: 35475

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLAPVLQQEAQALLNTAAQLRPDQAEAALDLLQHCSEQGAKLVVTGVGKSGIVARKIA
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
ATFTSIGLMALYLNPLDALHGDLGVVGAEDVVLLLSNSGESSELLALLPHLHRRGSACIA
HHHHHHHHHHHHHCHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
LTGRLDSSLARGAQVVLDGSVDREVCPLNLAPTASTAVAMAIGDALAAVWMQRQGITQAD
EECCHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
FAVNHPAGSLGRQLTLSVADLMVPIDTCPPLPPDAALPEVVDQLTGALAGAAWVQQPDQP
CEECCCCHHHHHHHHEEHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
KRLLGLITDGDLRRALRTHSPQAWASIQAADLMTTDPITAAPDQLAVAALELMERNRRKS
HHHEEECCCHHHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHCC
ISVLPVQAVSGELVGLLRLHDLVQAGLSRASGTTTDIPQAA
EEEEEHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNPLAPVLQQEAQALLNTAAQLRPDQAEAALDLLQHCSEQGAKLVVTGVGKSGIVARKIA
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
ATFTSIGLMALYLNPLDALHGDLGVVGAEDVVLLLSNSGESSELLALLPHLHRRGSACIA
HHHHHHHHHHHHHCHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
LTGRLDSSLARGAQVVLDGSVDREVCPLNLAPTASTAVAMAIGDALAAVWMQRQGITQAD
EECCHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
FAVNHPAGSLGRQLTLSVADLMVPIDTCPPLPPDAALPEVVDQLTGALAGAAWVQQPDQP
CEECCCCHHHHHHHHEEHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
KRLLGLITDGDLRRALRTHSPQAWASIQAADLMTTDPITAAPDQLAVAALELMERNRRKS
HHHEEECCCHHHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHCC
ISVLPVQAVSGELVGLLRLHDLVQAGLSRASGTTTDIPQAA
EEEEEHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]