Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148241290

Identifier: 148241290

GI number: 148241290

Start: 192017

End: 192247

Strand: Direct

Name: 148241290

Synonym: SynRCC307_0191

Alternate gene names: NA

Gene position: 192017-192247 (Clockwise)

Preceding gene: 148241289

Following gene: 148241291

Centisome position: 8.63

GC content: 44.59

Gene sequence:

>231_bases
ATGAGCACATTGACCAAAGCCGATGACCATTTTTTTGTTGCTGGAGCCAGGGGGATGGTTGGAAGCAGTATTTTTCGGGC
ATTAGAGCAAAAAGGCTATGGTGACGAAGTCTGTAGTGATGCTTTGTTAAAGCCCACACGTCAAACCCTTGACCGTTTTG
ATCGCGAAGCTGTTAAGATTTGGTTTAGAGACAAAAAGCTAACTGTTGGCGTTGGTTATGGTGAGGATTGA

Upstream 100 bases:

>100_bases
AAAGGAAGCCTTTCTTAAGCGAAAGAGCTTTTCAGTGGTTGGTTTGATGGAGACAGAATCGACTAACGAATTCTGATAGT
TTGAAGATTTGAGGTGAGGC

Downstream 100 bases:

>100_bases
TTGGGATTGTAGTAAGGCGGACGGGCGCCTTAGAAACAACTTGATGTTAGTCGCTTACCCGGTATAGGCTGGAAATCTCG
AATTTAGCTTTCCAAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSTLTKADDHFFVAGARGMVGSSIFRALEQKGYGDEVCSDALLKPTRQTLDRFDREAVKIWFRDKKLTVGVGYGED

Sequences:

>Translated_76_residues
MSTLTKADDHFFVAGARGMVGSSIFRALEQKGYGDEVCSDALLKPTRQTLDRFDREAVKIWFRDKKLTVGVGYGED
>Mature_75_residues
STLTKADDHFFVAGARGMVGSSIFRALEQKGYGDEVCSDALLKPTRQTLDRFDREAVKIWFRDKKLTVGVGYGED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8503; Mature: 8372

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLTKADDHFFVAGARGMVGSSIFRALEQKGYGDEVCSDALLKPTRQTLDRFDREAVKI
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
WFRDKKLTVGVGYGED
EECCCEEEEECCCCCC
>Mature Secondary Structure 
STLTKADDHFFVAGARGMVGSSIFRALEQKGYGDEVCSDALLKPTRQTLDRFDREAVKI
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
WFRDKKLTVGVGYGED
EECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA