Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241246

Identifier: 148241246

GI number: 148241246

Start: 141953

End: 143395

Strand: Direct

Name: 148241246

Synonym: SynRCC307_0147

Alternate gene names: NA

Gene position: 141953-143395 (Clockwise)

Preceding gene: 148241244

Following gene: 148241248

Centisome position: 6.38

GC content: 63.62

Gene sequence:

>1443_bases
TTGCATGCTCCAGCACCTGGTTGTGGCGGCGCAGGCTCAGCACGGAGCTTTCGATTTGGGGTTGCGGGCCCCAGTGCAGA
TGGTTCCCAAGGCCGCTGGGGACCCAGGGGCTGGCTTGGCTGTGGAGAGCGCGCACCAACTCCACCAGCTCGTGCCGGTC
GGGCGTTAGGAGTGGAGCCAGATCCGGCATGCCAGGCAATGGCGAGCAGCCCCAAGATCATCGTCTTTGACGATGACCCC
ACTGGCTCGCAGACCGTGCGGGGCTGTCCTCTGCTGCTTGAGTTCAGCACCGCCAACTTGCAGGCGGGTTTGGCTGATCC
CTCCCCGCTGCTGTTTTTGTTGACCAACAGCCGTGCCTTGGAGCCCGAGCAAGTGCGCCAAGAGCTCACGGCCCTGTGCC
GGCGCCTCAAGCCTTTGCTCGCGCAATTGACACGGCCTTGGCTGGTGGTAAGCCGCGGCGACTCCACCCTGCGCGGGCAC
ACGCCGCTCGAGCTGGAGGTGATCCGCGCTGAGTTGGGGCCCTTTGCCGCGAATGTGTTGGTGCCAGCCTTCCCGCAAGG
GGGGCGCACTACTAGAGATGGCGTGCACCTTTTGCATGGTGAGCCGCTGCATCACTCGGCGTTTGCCCGTGATCAGCGCT
TTGGCTACCCCAGCAGTGATTTGCCCCAATGGCTGCAGCACAAAACAGCAGGAGCGACCCCGGCTGATTGCGTCGCACGG
CTGAAGCCAGCCGATTCCTTTGCAGAGCTAGAGACGGGACAGTGGGCTGTGCTTGATGCCAGCACCCCCAATGATTTGGA
TGTGATCGGTGAGCAGGTGCTCGCTGAGCTGGCCAAAGGGCGGAAGCACCTCTGTCAGAGCGCAGCCAGCCTGCTGAACG
GCCTCAGCGAGATGCCATCGGTGTTGCTAGAGCCAGGGGAAGTGCCGCCGATTGCTGCTCCTGGCCTGGTGCTGGTGGGC
TCCCATGTGCCGCTCAGCGATGCCCAGCTGTCCTCGTTGCTTCAGCAGCCCGGTTGCTGTGGGGTGGAATTCAGCCTTGA
TGGGACACCTGAGCTGGGTGCGCTCACAGCTCAGGTGCAGCGGTTGTTGAGTGCTGGCCTCACGCCTGTGCTGTTCAGCA
GCCGCGGCGAACGGACTGGCTACAGCCCAGCGAGGCAAAGGGAGTTGGCTCTGCAGATGGCCCAGGTGGTGATGGATCTC
GAGCCACCGCTGGGCTACGTGATTGCCAAAGGCGGCACCACCAGCCTGACGTTCCTGCAGCAGGGCTTGCAGTTGCAGCA
GGTGCGCCTCCTAGGCCAGTTGCTGCCTGGTTTGTCCATGGTGCAGCCGCCTCTTCCCCACCCTCGTTTTGGCCGGCTGC
CTGTTGTCACTTTCCCCGGCAATTTGGGGGACCAGACAACCCTCAGCCGTTGCTGGCAGTTGCTGGAAGCAGCCCGGCGC
TAA

Upstream 100 bases:

>100_bases
AGTGGTGGATCGATGGGTAGCCACTGCCCACGCTCGGCCAGCACGGCTTGAAGCTCACTGAGCGCCATGCCGGCTTCCAC
CGTCACGGTGAAATCGCCGG

Downstream 100 bases:

>100_bases
TGGCGAGCAGTTGCATGGGGTGCAGCACTGGCGGTCCATCGGGGCCGACGTGCTGCCGAATCTGCAGGCTGCAGCCGATA
TTGGCGCTGGCGATCAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MHAPAPGCGGAGSARSFRFGVAGPSADGSQGRWGPRGWLGCGERAPTPPARAGRALGVEPDPACQAMASSPKIIVFDDDP
TGSQTVRGCPLLLEFSTANLQAGLADPSPLLFLLTNSRALEPEQVRQELTALCRRLKPLLAQLTRPWLVVSRGDSTLRGH
TPLELEVIRAELGPFAANVLVPAFPQGGRTTRDGVHLLHGEPLHHSAFARDQRFGYPSSDLPQWLQHKTAGATPADCVAR
LKPADSFAELETGQWAVLDASTPNDLDVIGEQVLAELAKGRKHLCQSAASLLNGLSEMPSVLLEPGEVPPIAAPGLVLVG
SHVPLSDAQLSSLLQQPGCCGVEFSLDGTPELGALTAQVQRLLSAGLTPVLFSSRGERTGYSPARQRELALQMAQVVMDL
EPPLGYVIAKGGTTSLTFLQQGLQLQQVRLLGQLLPGLSMVQPPLPHPRFGRLPVVTFPGNLGDQTTLSRCWQLLEAARR

Sequences:

>Translated_480_residues
MHAPAPGCGGAGSARSFRFGVAGPSADGSQGRWGPRGWLGCGERAPTPPARAGRALGVEPDPACQAMASSPKIIVFDDDP
TGSQTVRGCPLLLEFSTANLQAGLADPSPLLFLLTNSRALEPEQVRQELTALCRRLKPLLAQLTRPWLVVSRGDSTLRGH
TPLELEVIRAELGPFAANVLVPAFPQGGRTTRDGVHLLHGEPLHHSAFARDQRFGYPSSDLPQWLQHKTAGATPADCVAR
LKPADSFAELETGQWAVLDASTPNDLDVIGEQVLAELAKGRKHLCQSAASLLNGLSEMPSVLLEPGEVPPIAAPGLVLVG
SHVPLSDAQLSSLLQQPGCCGVEFSLDGTPELGALTAQVQRLLSAGLTPVLFSSRGERTGYSPARQRELALQMAQVVMDL
EPPLGYVIAKGGTTSLTFLQQGLQLQQVRLLGQLLPGLSMVQPPLPHPRFGRLPVVTFPGNLGDQTTLSRCWQLLEAARR
>Mature_480_residues
MHAPAPGCGGAGSARSFRFGVAGPSADGSQGRWGPRGWLGCGERAPTPPARAGRALGVEPDPACQAMASSPKIIVFDDDP
TGSQTVRGCPLLLEFSTANLQAGLADPSPLLFLLTNSRALEPEQVRQELTALCRRLKPLLAQLTRPWLVVSRGDSTLRGH
TPLELEVIRAELGPFAANVLVPAFPQGGRTTRDGVHLLHGEPLHHSAFARDQRFGYPSSDLPQWLQHKTAGATPADCVAR
LKPADSFAELETGQWAVLDASTPNDLDVIGEQVLAELAKGRKHLCQSAASLLNGLSEMPSVLLEPGEVPPIAAPGLVLVG
SHVPLSDAQLSSLLQQPGCCGVEFSLDGTPELGALTAQVQRLLSAGLTPVLFSSRGERTGYSPARQRELALQMAQVVMDL
EPPLGYVIAKGGTTSLTFLQQGLQLQQVRLLGQLLPGLSMVQPPLPHPRFGRLPVVTFPGNLGDQTTLSRCWQLLEAARR

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50948; Mature: 50948

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPAPGCGGAGSARSFRFGVAGPSADGSQGRWGPRGWLGCGERAPTPPARAGRALGVEP
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
DPACQAMASSPKIIVFDDDPTGSQTVRGCPLLLEFSTANLQAGLADPSPLLFLLTNSRAL
CHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
EPEQVRQELTALCRRLKPLLAQLTRPWLVVSRGDSTLRGHTPLELEVIRAELGPFAANVL
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHE
VPAFPQGGRTTRDGVHLLHGEPLHHSAFARDQRFGYPSSDLPQWLQHKTAGATPADCVAR
EECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHH
LKPADSFAELETGQWAVLDASTPNDLDVIGEQVLAELAKGRKHLCQSAASLLNGLSEMPS
CCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLEPGEVPPIAAPGLVLVGSHVPLSDAQLSSLLQQPGCCGVEFSLDGTPELGALTAQVQ
HHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH
RLLSAGLTPVLFSSRGERTGYSPARQRELALQMAQVVMDLEPPLGYVIAKGGTTSLTFLQ
HHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
QGLQLQQVRLLGQLLPGLSMVQPPLPHPRFGRLPVVTFPGNLGDQTTLSRCWQLLEAARR
HCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHAPAPGCGGAGSARSFRFGVAGPSADGSQGRWGPRGWLGCGERAPTPPARAGRALGVEP
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
DPACQAMASSPKIIVFDDDPTGSQTVRGCPLLLEFSTANLQAGLADPSPLLFLLTNSRAL
CHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
EPEQVRQELTALCRRLKPLLAQLTRPWLVVSRGDSTLRGHTPLELEVIRAELGPFAANVL
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHE
VPAFPQGGRTTRDGVHLLHGEPLHHSAFARDQRFGYPSSDLPQWLQHKTAGATPADCVAR
EECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHH
LKPADSFAELETGQWAVLDASTPNDLDVIGEQVLAELAKGRKHLCQSAASLLNGLSEMPS
CCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLEPGEVPPIAAPGLVLVGSHVPLSDAQLSSLLQQPGCCGVEFSLDGTPELGALTAQVQ
HHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH
RLLSAGLTPVLFSSRGERTGYSPARQRELALQMAQVVMDLEPPLGYVIAKGGTTSLTFLQ
HHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
QGLQLQQVRLLGQLLPGLSMVQPPLPHPRFGRLPVVTFPGNLGDQTTLSRCWQLLEAARR
HCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA