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The map label for this gene is 148241224

Identifier: 148241224

GI number: 148241224

Start: 120790

End: 121548

Strand: Direct

Name: 148241224

Synonym: SynRCC307_0125

Alternate gene names: NA

Gene position: 120790-121548 (Clockwise)

Preceding gene: 148241223

Following gene: 148241225

Centisome position: 5.43

GC content: 61.92

Gene sequence:

>759_bases
ATGGCTTGGCTGATGCCAACTCTGTTGGCGTTGCTGTTGGGCACCACCGGGCTGGCCGATCAGTTTCACCAGGCTTTGGA
GGCCAGCCAACAGGGACGTTTCGCTGAAGCTCTCGGACTTTGGGATGGCGTGATTGAGCTTGCTCCAGCAGACAGCGCAG
CCTGGAGCAACCGCGGCAATGTGCGTTTGGCCTTGGGTGACCCAGAGGGTGCCATTGCCGATCAGACCGAGGCGATCCGC
TTGGAGCCTGAGGCGATCGACCCCCATCTCAATCGCGGCACTGCCGAAGAAGCCCTAGCCCAATGGGATCAAGCAGCAGC
TGATTACAACTGGATTTTGGAGCGCCAGCCCGATGAGGCCGCCGCCCTTTACAACCTGGGCAATGTGGCCGGCAGCCTCG
GGGATTGGCCTGCCGCACGGGAGCGATTTGAAGCGGCATCGCTCGCTCAGCCAGGGATGGCCATGGCGCGCTCTAGTGCT
GCTTTGGCAGCCTTTCAAATCGATGAGCTGGAGACCTCAGAGAAGGAATTACGCCGGTTGATTCGCCGTTACCCCCTGTT
TGCGGATGCCCGTGCGGCCCTAACGGCGTTGCTGTGGCAGCAAGGCAACGCTGGTGAGGCCGAGAGCCATTGGGCCGCAG
CTTCAGGTTTGGATGAGCGCTACAGCGATCCGCAGTGGTTGCTGCAGGTGCGCCGCTGGCCGCCTGAGCCAGTCAGCGCA
TTGCAGCGGTTTTTGGCTCTCGATGGGGGCCAGCCATGA

Upstream 100 bases:

>100_bases
CTGTGGTGGAACCGTTTCTGTTGCAACTTGGTTTTCTGCAGCGCACCCCTCGCGGGCGTGTGTTGACTGACGCCGGCAGG
GCCCATTTGGAGGCCGCTTG

Downstream 100 bases:

>100_bases
ACGATCAGGCCGCCCTGCTGGAGATCCGCCGCTATCTGCATGCCCATCCGGAGTTGAGCGGCCATGAACAGCGCACTGCG
GCGTTGGTGGCTGGTGAATT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAWLMPTLLALLLGTTGLADQFHQALEASQQGRFAEALGLWDGVIELAPADSAAWSNRGNVRLALGDPEGAIADQTEAIR
LEPEAIDPHLNRGTAEEALAQWDQAAADYNWILERQPDEAAALYNLGNVAGSLGDWPAARERFEAASLAQPGMAMARSSA
ALAAFQIDELETSEKELRRLIRRYPLFADARAALTALLWQQGNAGEAESHWAAASGLDERYSDPQWLLQVRRWPPEPVSA
LQRFLALDGGQP

Sequences:

>Translated_252_residues
MAWLMPTLLALLLGTTGLADQFHQALEASQQGRFAEALGLWDGVIELAPADSAAWSNRGNVRLALGDPEGAIADQTEAIR
LEPEAIDPHLNRGTAEEALAQWDQAAADYNWILERQPDEAAALYNLGNVAGSLGDWPAARERFEAASLAQPGMAMARSSA
ALAAFQIDELETSEKELRRLIRRYPLFADARAALTALLWQQGNAGEAESHWAAASGLDERYSDPQWLLQVRRWPPEPVSA
LQRFLALDGGQP
>Mature_251_residues
AWLMPTLLALLLGTTGLADQFHQALEASQQGRFAEALGLWDGVIELAPADSAAWSNRGNVRLALGDPEGAIADQTEAIRL
EPEAIDPHLNRGTAEEALAQWDQAAADYNWILERQPDEAAALYNLGNVAGSLGDWPAARERFEAASLAQPGMAMARSSAA
LAAFQIDELETSEKELRRLIRRYPLFADARAALTALLWQQGNAGEAESHWAAASGLDERYSDPQWLLQVRRWPPEPVSAL
QRFLALDGGQP

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 27449; Mature: 27318

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWLMPTLLALLLGTTGLADQFHQALEASQQGRFAEALGLWDGVIELAPADSAAWSNRGN
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VRLALGDPEGAIADQTEAIRLEPEAIDPHLNRGTAEEALAQWDQAAADYNWILERQPDEA
EEEEECCCCCCCCCCCCEEEECCHHCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHH
AALYNLGNVAGSLGDWPAARERFEAASLAQPGMAMARSSAALAAFQIDELETSEKELRRL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IRRYPLFADARAALTALLWQQGNAGEAESHWAAASGLDERYSDPQWLLQVRRWPPEPVSA
HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHHHH
LQRFLALDGGQP
HHHHHHHCCCCC
>Mature Secondary Structure 
AWLMPTLLALLLGTTGLADQFHQALEASQQGRFAEALGLWDGVIELAPADSAAWSNRGN
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VRLALGDPEGAIADQTEAIRLEPEAIDPHLNRGTAEEALAQWDQAAADYNWILERQPDEA
EEEEECCCCCCCCCCCCEEEECCHHCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHH
AALYNLGNVAGSLGDWPAARERFEAASLAQPGMAMARSSAALAAFQIDELETSEKELRRL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IRRYPLFADARAALTALLWQQGNAGEAESHWAAASGLDERYSDPQWLLQVRRWPPEPVSA
HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHHHH
LQRFLALDGGQP
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]