Click here to switch to the map view.

The map label for this gene is yrdB [C]

Identifier: 147675777

GI number: 147675777

Start: 2616552

End: 2616827

Strand: Reverse

Name: yrdB [C]

Synonym: VC0395_A2462

Alternate gene names: 147675777

Gene position: 2616827-2616552 (Counterclockwise)

Preceding gene: 147674570

Following gene: 147675145

Centisome position: 86.53

GC content: 44.93

Gene sequence:

>276_bases
ATGAACCAATCCATCTTGTTTCCCGATTTACAGCATTGGGATGAGGCAAAACAAGCTGTTGTATTTTTTGCTCAGCAAAA
CGGAGCATTAATCGAATGTCTTGTGGCGCGACAAGTTCTACAAGAGCTCTCAGGTGAAGCTTTAGCAGAATCGCAACACG
TGATGACGGCCTTCAGTGAGTGGCGTTTTGACCTAGAGGAACTCGCCGAACAGGCGATTGAAAACGAAATGTTTAACTCT
CTAGGCCAAATTGAGATCACTCGCGAACGGTTTTAA

Upstream 100 bases:

>100_bases
TAGTGGGACAAGCGGCTGAAAGTTTTATGCTATGGCGTGGTTTACGTCCGGGCACGAAACAAATTTTGCGTGAACTGCGT
AAAAATCTAGAAGGTGCGCT

Downstream 100 bases:

>100_bases
CGTCATTCAGATAGTCATTCTTACTCTGAACATAATTACTGGACGATTTAACGAGAAAAGCACGCTCCTTATCACTGAGA
GGACGTGCTTGCTTGACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNQSILFPDLQHWDEAKQAVVFFAQQNGALIECLVARQVLQELSGEALAESQHVMTAFSEWRFDLEELAEQAIENEMFNS
LGQIEITRERF

Sequences:

>Translated_91_residues
MNQSILFPDLQHWDEAKQAVVFFAQQNGALIECLVARQVLQELSGEALAESQHVMTAFSEWRFDLEELAEQAIENEMFNS
LGQIEITRERF
>Mature_91_residues
MNQSILFPDLQHWDEAKQAVVFFAQQNGALIECLVARQVLQELSGEALAESQHVMTAFSEWRFDLEELAEQAIENEMFNS
LGQIEITRERF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10516; Mature: 10516

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSILFPDLQHWDEAKQAVVFFAQQNGALIECLVARQVLQELSGEALAESQHVMTAFSE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WRFDLEELAEQAIENEMFNSLGQIEITRERF
HCCCHHHHHHHHHHHHHHHHCCCEEECCCCC
>Mature Secondary Structure
MNQSILFPDLQHWDEAKQAVVFFAQQNGALIECLVARQVLQELSGEALAESQHVMTAFSE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
WRFDLEELAEQAIENEMFNSLGQIEITRERF
HCCCHHHHHHHHHHHHHHHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA