Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147675683

Identifier: 147675683

GI number: 147675683

Start: 115637

End: 116989

Strand: Direct

Name: 147675683

Synonym: VC0395_A0129

Alternate gene names: NA

Gene position: 115637-116989 (Clockwise)

Preceding gene: 147674111

Following gene: 147673788

Centisome position: 3.82

GC content: 51.0

Gene sequence:

>1353_bases
TTGCGTAAGTTTTTGAAAAATATAGCCCTATTTAAGGTTGTATTGCTGGCTGTTCTCGCGTTGTCAATTTGGTCTACCCG
TATTCCCGATATGCCCTATCATCAAGTCACGCCTGAGTTGAGTCGGTCTGATTTCCATGTCATTGAATTTAATGATGAGG
GTGAAATGCACCTGCCTAGGCAATACGAGATTTTGAAGGCGAGGTTAGCCAAAAACCCTGGAGCGGAACTGCTGATTTTT
ATTCACGGTTGGCACCATAATGCGGCTCCCACTGACGATAATTTTGTCGCTTTTCAACGTTTTCATCGCCAGATGGCGAA
GACCAATCCAGGCCTCATCGGGCTGTATATCGGTTGGCGGGGGGATCAATATGATCCCTTGTGGTTGGATGGTTCAGACG
ATCCTGAAAGTCGAGTTGAAGCATTGGATTTTCCGACCATATTAACCAGCAAGCAGGTGGCGCGAAGAGTTGGCGAGCAT
GGGGTGAGAAAGCTGCTGAGTTCGCTGGATAAATTGCATCGTCAAGGAACGCTAGGGCGCTATATTTTAGTTGGGCACAG
CTTGGGTGGTGTGGTTGCGCTGCACGCCCGCAAACAGGCGATTTTGGATAATCTGGCGGCAGGTCGCGGTGAAACCCATT
TAACGGTGCTTTTAAACCCCGCTGCCTCTGCCAAAGAGTATCAGCCATTGGATAAGTGGTTGAGTCCAGAAGGTTTTGGT
CCATCCATGCTGGTGTTGCAGTCCAAAACCGATTTTGCGGTACGTGAGGCCTTTAACTGGATCAAAGATGGCGAGCGCGC
CGTGGGTAACTCTTGGGCAATCACTCATGATGTGGACCCGTGCTCGGGGCGTGATTGTAATAAAGTGGTCAAAATCCCTC
AGTGGCTGCTTGAGCACGATGCGAAACCGGGTTGCATGCAGGTATTGCAAGGGGCTGGCTGGAAAATTCGCGCCAGATTG
CACGCCCGCAAAACCGTACAAAGTTGCGAAGATGCCAACCGTCAGGCTGTGTGGGTACTTGCTGTGGCCGATGGTGTGAT
TGCTGGCCATAACGGCATTTTAACGGATGATCAGGCATTAGCTTTGAATGCTTGGATGAAGTCTAAGCTCACGGCAGCAA
CCGAAGTTGTTCCTACTGAAGCCGTGGCGGAGCCCAGTGTTATCTCTCCCCATCTTAGCGATGAGCCTGTGCTGCCGAGC
ATGGAAAACATACCCACAGAGGTTGCAACTGAGCCGCTTTCAAGTGCGGTAGAGCTTGAGCCACAAGAGAGCGAGAGTGC
TGTGCCAGCGATTTCTGAACCCACGCTTGAGGCACCTTTGGTTGCCCAACCGGAAGAGAGAGCACCACAGTAA

Upstream 100 bases:

>100_bases
AGGTGAGAAAGTCCCTCATTCCGCCTCTGGTGAAGCATTGAAGTTGAACATATAATGGCCGCCCGCCCGAGTCTGGGTAT
CTGTTTTTTGGTAAGCTTCC

Downstream 100 bases:

>100_bases
GTTTTTTGTCTGCAGTACCTCTTGATAGGAATGCACTTTGGGCACGGACTCCGTTTTATGTACAATGGCGCGGCCATTTA
ACCTTGTAGGAAGCGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MRKFLKNIALFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPRQYEILKARLAKNPGAELLIF
IHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWRGDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEH
GVRKLLSSLDKLHRQGTLGRYILVGHSLGGVVALHARKQAILDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHDAKPGCMQVLQGAGWKIRARL
HARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQALALNAWMKSKLTAATEVVPTEAVAEPSVISPHLSDEPVLPS
MENIPTEVATEPLSSAVELEPQESESAVPAISEPTLEAPLVAQPEERAPQ

Sequences:

>Translated_450_residues
MRKFLKNIALFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPRQYEILKARLAKNPGAELLIF
IHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWRGDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEH
GVRKLLSSLDKLHRQGTLGRYILVGHSLGGVVALHARKQAILDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHDAKPGCMQVLQGAGWKIRARL
HARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQALALNAWMKSKLTAATEVVPTEAVAEPSVISPHLSDEPVLPS
MENIPTEVATEPLSSAVELEPQESESAVPAISEPTLEAPLVAQPEERAPQ
>Mature_450_residues
MRKFLKNIALFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPRQYEILKARLAKNPGAELLIF
IHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWRGDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEH
GVRKLLSSLDKLHRQGTLGRYILVGHSLGGVVALHARKQAILDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHDAKPGCMQVLQGAGWKIRARL
HARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQALALNAWMKSKLTAATEVVPTEAVAEPSVISPHLSDEPVLPS
MENIPTEVATEPLSSAVELEPQESESAVPAISEPTLEAPLVAQPEERAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49699; Mature: 49699

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLKNIALFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEECCCCCEECCH
QYEILKARLAKNPGAELLIFIHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWR
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
GDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEHGVRKLLSSLDKLHRQGTLGR
CCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YILVGHSLGGVVALHARKQAILDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
EEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCCHHHHHCCCCCCC
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHD
CCEEEEECCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
AKPGCMQVLQGAGWKIRARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQAL
CCCHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCCCCCCHH
ALNAWMKSKLTAATEVVPTEAVAEPSVISPHLSDEPVLPSMENIPTEVATEPLSSAVELE
HHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHEECC
PQESESAVPAISEPTLEAPLVAQPEERAPQ
CCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRKFLKNIALFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEECCCCCEECCH
QYEILKARLAKNPGAELLIFIHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWR
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
GDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEHGVRKLLSSLDKLHRQGTLGR
CCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YILVGHSLGGVVALHARKQAILDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
EEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCCHHHHHCCCCCCC
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHD
CCEEEEECCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
AKPGCMQVLQGAGWKIRARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQAL
CCCHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCCCCCCHH
ALNAWMKSKLTAATEVVPTEAVAEPSVISPHLSDEPVLPSMENIPTEVATEPLSSAVELE
HHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHEECC
PQESESAVPAISEPTLEAPLVAQPEERAPQ
CCCCCCCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA