| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is vieB
Identifier: 147675675
GI number: 147675675
Start: 1331734
End: 1333395
Strand: Reverse
Name: vieB
Synonym: VC0395_A1257
Alternate gene names: NA
Gene position: 1333395-1331734 (Counterclockwise)
Preceding gene: 147675130
Following gene: 147673259
Centisome position: 44.09
GC content: 44.95
Gene sequence:
>1662_bases ATGGCTGTACCTACTTTTGCTGAATTAAAAGTTTTAATCATCGACGATGCGCCGATAGTCATTGCCAGTTTACGCAGCAT GTTGCTCAAGCTGGGTTTCACTGAGCCAAACATAGTGTGGAGTAAAAGCCCACGAGCCGCGGTATTCATGGCCGGAAGGC AGAGATTTGATATTTTTATTTGCGATTACAACTTCGGTAAGGGGTTGAATGGTAAGCAAGTTTTTGAGGAGCTAAAACAC TATAAACTCATCAAGCAAGACGCGGTATTTGTATTAGTTACAGGTGAGAATTCGGCGTATGTCGTGCATTCGATTCTGGA GCTCAAACCGGATGAGTATATCCTAAAACCCTTCAATATCATGACCTTGCAGGAGCGTTTAACTAACGCTATCTCACGCA AACATGCGCTCAAAGCCCTCTATCAAGCAGAACGCGATGGCGATGCTGAATTAGGTCTGAGTTTGTGTGACGAGCTGGAG CCTTTTTACAACGATTACTATTTCGTGATCCAAAAATTTCGTGGGGAATTTTTAACTCAGTTGCGCCGTTTTGATCACGC GCGCGAAGTCTACCTCGAAACGTTAGAGCATAAAGACTTTGATTGGGCAAAAATTGGTCTTGCGAATGCCCTCAAGCAGA CCGGGCGTCAAGTCGAAGCCACACAAGTGATACAAGAACTGCTGGCGAGTGCTCCCAATAATGTGCGAGCTCGGGTGGAA GCGGCGAGCATCAGTCTATGCAATAACTCAATTCCTGAAGCCATTCACCATTTACAGGTTGCCAACCAAATTGTCCCCGG ACATTCAGAGCGTGAATGGGTACTGGCGAATCTGTGCTTATCGGTTGGGGATGGAGCCTCTGCTCTCGAGCGCTATCGCT TGTATGTGGAAATTAACAAAGAGACTTATCGTAACAATCATCAGATGCACCTCAATTTTATTCGTACTTTGCTTTATGCC GCCCGACAAGCGGAATCGGAACAGCGTGATCTGTGGGTGCAAGAGGCGAAATCCATTCTGAAAGGGCTTTACGATAAAGG CCAGCATGAAGATCTGCTTGCCCAACTCGAATTAGTGGCTGCGCATTTAGCGATGGAAGAGGGTGAATTTGGGGTTTCAG TGGAAATTTTAAACAAGATTTATCGCGCTAAACCGTTCGAATTGTTTGAAGACCGCTACCATTTTACGTGGCTACTCAAT GTGATGGGGTTTGACTCTGAATTTGCCAAATGCATCAGTTGGTGTAATGAAACCCTGTTAAATCAAGAAACAGACATCGT TTTAGAAAGTAAAGTGGCTTTAGCTAAGGCATTAAAAGAAGCTAATCAAGAGAAGCTGCAATGGCTTGAACAACGCTATC ACGCACTTTGTAATAAACAGCAGACCATCGACTCGCTGCTTGCGATTTACATCGAAATTTTAGAAAAGTGCCCGACATTG CGTACTGTATGTATGAAAGTGGTGACGATATTTTCTCGCTACTGGCCGACGGCATTAACGGAATCGGAAGCAGAACGCTT GCTGAAAAGTTGTCATCGCACCATCCGACAACTGATGAATGAAGAAGAGTTACAGCAAGCTCAATACGCGGAGTTGTATC GAAAAGCACTCACTTTTCGTAGTCGCTATCGTTTACAGCGAACCGAATCAGTTGAGGCGTAA
Upstream 100 bases:
>100_bases AAACAGTAAGCACTTACAAGACTAGGATTATGACCAAGTTAGGGATTAAATCGGCCATGGAATTGGTGCGTTTTGTAACA TTAAAATAGTACCGAGAGTT
Downstream 100 bases:
>100_bases CCGCCCTCTACAGAGGACGATTACGCCGTATCATCAGTCGAAATAGGCCACCATTTCGACCGTGTCGCCGAGTTGTTGTG CGTTTAACGAAAAGTGCACA
Product: response regulator VieB
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver Domain-Containing Protein; Response Regulator VieB; Response Regulator/TPR Domain-Containing Protein; Response Regulator Receiver Domain Protein; CheY-Like Receiver Protein; TPR Repeat-Containing Response Regulator; CheY-Like Response Regulator Receiver; Response Regulator Receiver; Two Component Transcriptional Regulator AraC Family; Transcription Regulator Protein; Response Regulator With TPR Repeat; CheY-Like Receiver; Response Receiver Protein; TPR Motives; PAS/PAC Sensor Protein; TPR Motif Protein; Response Regulator/TPR Domain Protein
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MAVPTFAELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGKGLNGKQVFEELKH YKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERLTNAISRKHALKALYQAERDGDAELGLSLCDELE PFYNDYYFVIQKFRGEFLTQLRRFDHAREVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVE AASISLCNNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINKETYRNNHQMHLNFIRTLLYA ARQAESEQRDLWVQEAKSILKGLYDKGQHEDLLAQLELVAAHLAMEEGEFGVSVEILNKIYRAKPFELFEDRYHFTWLLN VMGFDSEFAKCISWCNETLLNQETDIVLESKVALAKALKEANQEKLQWLEQRYHALCNKQQTIDSLLAIYIEILEKCPTL RTVCMKVVTIFSRYWPTALTESEAERLLKSCHRTIRQLMNEEELQQAQYAELYRKALTFRSRYRLQRTESVEA
Sequences:
>Translated_553_residues MAVPTFAELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGKGLNGKQVFEELKH YKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERLTNAISRKHALKALYQAERDGDAELGLSLCDELE PFYNDYYFVIQKFRGEFLTQLRRFDHAREVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVE AASISLCNNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINKETYRNNHQMHLNFIRTLLYA ARQAESEQRDLWVQEAKSILKGLYDKGQHEDLLAQLELVAAHLAMEEGEFGVSVEILNKIYRAKPFELFEDRYHFTWLLN VMGFDSEFAKCISWCNETLLNQETDIVLESKVALAKALKEANQEKLQWLEQRYHALCNKQQTIDSLLAIYIEILEKCPTL RTVCMKVVTIFSRYWPTALTESEAERLLKSCHRTIRQLMNEEELQQAQYAELYRKALTFRSRYRLQRTESVEA >Mature_552_residues AVPTFAELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGKGLNGKQVFEELKHY KLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERLTNAISRKHALKALYQAERDGDAELGLSLCDELEP FYNDYYFVIQKFRGEFLTQLRRFDHAREVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVEA ASISLCNNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINKETYRNNHQMHLNFIRTLLYAA RQAESEQRDLWVQEAKSILKGLYDKGQHEDLLAQLELVAAHLAMEEGEFGVSVEILNKIYRAKPFELFEDRYHFTWLLNV MGFDSEFAKCISWCNETLLNQETDIVLESKVALAKALKEANQEKLQWLEQRYHALCNKQQTIDSLLAIYIEILEKCPTLR TVCMKVVTIFSRYWPTALTESEAERLLKSCHRTIRQLMNEEELQQAQYAELYRKALTFRSRYRLQRTESVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63972; Mature: 63841
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPTFAELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFI CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCEEEEEE CDYNFGKGLNGKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNI EECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEECCCHH MTLQERLTNAISRKHALKALYQAERDGDAELGLSLCDELEPFYNDYYFVIQKFRGEFLTQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LRRFDHAREVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHEEH AASISLCNNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINK HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEEEECH ETYRNNHQMHLNFIRTLLYAARQAESEQRDLWVQEAKSILKGLYDKGQHEDLLAQLELVA HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AHLAMEEGEFGVSVEILNKIYRAKPFELFEDRYHFTWLLNVMGFDSEFAKCISWCNETLL HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHC NQETDIVLESKVALAKALKEANQEKLQWLEQRYHALCNKQQTIDSLLAIYIEILEKCPTL CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH RTVCMKVVTIFSRYWPTALTESEAERLLKSCHRTIRQLMNEEELQQAQYAELYRKALTFR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH SRYRLQRTESVEA HHHHHHHHHCCCC >Mature Secondary Structure AVPTFAELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFI CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCEEEEEE CDYNFGKGLNGKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNI EECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEECCCHH MTLQERLTNAISRKHALKALYQAERDGDAELGLSLCDELEPFYNDYYFVIQKFRGEFLTQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LRRFDHAREVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHEEH AASISLCNNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINK HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEEEECH ETYRNNHQMHLNFIRTLLYAARQAESEQRDLWVQEAKSILKGLYDKGQHEDLLAQLELVA HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AHLAMEEGEFGVSVEILNKIYRAKPFELFEDRYHFTWLLNVMGFDSEFAKCISWCNETLL HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHC NQETDIVLESKVALAKALKEANQEKLQWLEQRYHALCNKQQTIDSLLAIYIEILEKCPTL CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH RTVCMKVVTIFSRYWPTALTESEAERLLKSCHRTIRQLMNEEELQQAQYAELYRKALTFR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH SRYRLQRTESVEA HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA