Click here to switch to the map view.

The map label for this gene is glgC

Identifier: 147675674

GI number: 147675674

Start: 1418445

End: 1419662

Strand: Reverse

Name: glgC

Synonym: VC0395_A1330

Alternate gene names: 147675674

Gene position: 1419662-1418445 (Counterclockwise)

Preceding gene: 147675774

Following gene: 147673151

Centisome position: 46.95

GC content: 46.47

Gene sequence:

>1218_bases
ATGGCTGGAGTATTAGGCATGATTTTGGCGGGAGGAGAAGGGTCACGTTTGAAGCCGTTGACTGAAACCCGTACCAAGCC
GGCAGTTCCTTTTGGTGGAAGCTACCGTTTAATCGACTTTGCACTCAATAATTTCGTGAATGCCGATTTAATGCGGATTT
ATGTTCTGACGCAGTTCAAATCGCAATCGCTATACATTCATATGAAAAAGGGCTGGAATCTTTCCGGGATCACAGACCGT
TTTATCGACATTATTCCAGCACAGATGCGTGATGGAAAACGTTGGTATGAAGGCACTGCCGATGCGATTTATCAAAACCT
CCGTTTTGTTGAGATCGTCGCGCCGGATCAAGTCTGTATTTTTGGTTCAGACCATATCTACAAGATGGATATTCGCCAAA
TGCTCGATTTTCATCGCCGTATGGAAGCGGAGTTGACCGTTTCTGCACTGCGTATGCCGATCAGCCAAGCCTCTCAGTTC
GGGGTGATTGAAGTGGATGAAAACGGCAAAATGGTCGGTTTTGAAGAGAAACCGAGCAATCCCAAATCGATCCCCGGTGA
GCCTGAGTGGGCACTGGTCTCGATGGGTAACTACATCTTCGAAGCGGAAACGCTCAGCAAAGAACTGCGTGAAGATGCTG
AAAATAACCAGTCCAGCCATGACTTTGGCAAAGACATTATTCCGAAAATGTTCCCGCGCGGTAAAGTCTATGTGTATGAC
TTCACGACCAACAAAATTAAGGGAGAGAAGGAATCGACCTACTGGCGTGATGTCGGAACCATCGAATCGTATTGGTCGGC
ACATATGGACTTGCTCGACAAAGATCCAGAATTTTCGCTATACAACCGTAGTTGGCCGCTGCACACCTACTATCCTCCTT
TGCCACCTGCGACGTTTGTGGATGTCAAAGACAAGAAAGTCAAAATCACAGATAGCTTGATCTCTGGGGGAAGTTATATC
CAAGGATCAACCATTTATAAATCAGTTCTGGGTTTCCGTAGCAACATTGCTGCTGGCTCTTTTATCAGTGAATCTGTTAT
CTTGGGCGACGTGAAAATTGGAGCTGGCTGCACGATTAAGCGCGCCATTATCGATAAAGATGTCGAGATCGCCGCCGGTA
CCATCATTGGTGAAGATTTGGAAATGGACAGAAAGCGTTTCCACGTTTCCGATGAAGGGATTGTGGTGATTGCGAAAGGT
AGTAAGGTAGGATTCTAG

Upstream 100 bases:

>100_bases
TACTGATGTTGCTGTCGGTTAGCATGGAGCGCCGAGCCAGGACCCCCAAAGCAAAAATTTCGTGGTTCGGCAAATATTAT
AAAAGAATGGAGAACAACAC

Downstream 100 bases:

>100_bases
AATGGAACAATTCAACGTTTGGTTTACCGTTTCAGAAGTACAGGGGCTGGTAAAAAGTGGTGGCCTGGCCGATGTGGCAA
AAGCGCTGCCACAAGCGTTG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase 1; ADPGlc PPase 1; ADP-glucose synthase 1

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MAGVLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLYIHMKKGWNLSGITDR
FIDIIPAQMRDGKRWYEGTADAIYQNLRFVEIVAPDQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVSALRMPISQASQF
GVIEVDENGKMVGFEEKPSNPKSIPGEPEWALVSMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYD
FTTNKIKGEKESTYWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSLISGGSYI
QGSTIYKSVLGFRSNIAAGSFISESVILGDVKIGAGCTIKRAIIDKDVEIAAGTIIGEDLEMDRKRFHVSDEGIVVIAKG
SKVGF

Sequences:

>Translated_405_residues
MAGVLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLYIHMKKGWNLSGITDR
FIDIIPAQMRDGKRWYEGTADAIYQNLRFVEIVAPDQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVSALRMPISQASQF
GVIEVDENGKMVGFEEKPSNPKSIPGEPEWALVSMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYD
FTTNKIKGEKESTYWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSLISGGSYI
QGSTIYKSVLGFRSNIAAGSFISESVILGDVKIGAGCTIKRAIIDKDVEIAAGTIIGEDLEMDRKRFHVSDEGIVVIAKG
SKVGF
>Mature_404_residues
AGVLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLYIHMKKGWNLSGITDRF
IDIIPAQMRDGKRWYEGTADAIYQNLRFVEIVAPDQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVSALRMPISQASQFG
VIEVDENGKMVGFEEKPSNPKSIPGEPEWALVSMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYDF
TTNKIKGEKESTYWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSLISGGSYIQ
GSTIYKSVLGFRSNIAAGSFISESVILGDVKIGAGCTIKRAIIDKDVEIAAGTIIGEDLEMDRKRFHVSDEGIVVIAKGS
KVGF

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Escherichia coli, GI1789837, Length=399, Percent_Identity=44.1102756892231, Blast_Score=359, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC1_VIBCH (Q9KRB5)

Other databases:

- EMBL:   AE003852
- PIR:   G82165
- RefSeq:   NP_231363.1
- ProteinModelPortal:   Q9KRB5
- SMR:   Q9KRB5
- GeneID:   2613732
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC1727
- TIGR:   VC_1727
- HOGENOM:   HBG703946
- OMA:   SLYNRKW
- ProtClustDB:   PRK00844
- BRENDA:   2.7.7.27
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 45498; Mature: 45366

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFK
CCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEEEEEEC
SQSLYIHMKKGWNLSGITDRFIDIIPAQMRDGKRWYEGTADAIYQNLRFVEIVAPDQVCI
CCEEEEEEECCCCCCCCHHHHHHHHCHHHCCCCHHHCCCHHHHHHCCEEEEEECCCEEEE
FGSDHIYKMDIRQMLDFHRRMEAELTVSALRMPISQASQFGVIEVDENGKMVGFEEKPSN
ECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEEECCCCCC
PKSIPGEPEWALVSMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYD
CCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEE
FTTNKIKGEKESTYWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFV
EECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEE
DVKDKKVKITDSLISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILGDVKIGAGCTIK
ECCCCEEEEEHHHHCCCCEEECHHHHHHHHHHHCCCCCCCHHCCCEEEEEEEECCCCEEE
RAIIDKDVEIAAGTIIGEDLEMDRKRFHVSDEGIVVIAKGSKVGF
HHHHCCCCEEEEEEEECCCHHHHHHHEEECCCCEEEEECCCCCCC
>Mature Secondary Structure 
AGVLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFK
CCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEEEEEEC
SQSLYIHMKKGWNLSGITDRFIDIIPAQMRDGKRWYEGTADAIYQNLRFVEIVAPDQVCI
CCEEEEEEECCCCCCCCHHHHHHHHCHHHCCCCHHHCCCHHHHHHCCEEEEEECCCEEEE
FGSDHIYKMDIRQMLDFHRRMEAELTVSALRMPISQASQFGVIEVDENGKMVGFEEKPSN
ECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEEECCCCCC
PKSIPGEPEWALVSMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYD
CCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEE
FTTNKIKGEKESTYWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFV
EECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEE
DVKDKKVKITDSLISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILGDVKIGAGCTIK
ECCCCEEEEEHHHHCCCCEEECHHHHHHHHHHHCCCCCCCHHCCCEEEEEEEECCCCEEE
RAIIDKDVEIAAGTIIGEDLEMDRKRFHVSDEGIVVIAKGSKVGF
HHHHCCCCEEEEEEEECCCHHHHHHHEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301