| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is qxtA [H]
Identifier: 147675651
GI number: 147675651
Start: 1235964
End: 1237301
Strand: Reverse
Name: qxtA [H]
Synonym: VC0395_A1175
Alternate gene names: 147675651
Gene position: 1237301-1235964 (Counterclockwise)
Preceding gene: 147673036
Following gene: 147673606
Centisome position: 40.92
GC content: 50.75
Gene sequence:
>1338_bases ATGTTAGATACCCTCATGCTGTCGCGGATCCAATTCGCTGCCAATATCAGCTTTCATATACTGTTTCCCACCATCACCAT TGCGTTGGGCTGGATATTGGTGTTTTTCAAATGGCGTTATTTACGAACACAAGTCAGTGAATGGCTCGATCTCTACTATT TCTGGGTAAAAGTGTTTGCGCTGACTTTTGCTCTTGGGGTGGTGTCGGGCATTACCATGAGTTTTCAATTTGGCACTAAC TGGCCGGGCTTTATGGAGCGGGTGGGCAATGTGGCAGGTCCCTTACTTGGCTATGAAGTGATGACCGCCTTCTTTATGGA AGCGACGTTTCTTGGTGTGATGCTGTTTGGCCGAGGGCGTGTACCCGAATGGTTGCACACACTATCGACTGTGCTGGTGG CCGTGGGCACAAGTTTATCTGCGTTTTGGATTCTGGTGCTCAACAGTTGGATGCACACTCCAGCCGGTTATGAAGTGATT GATGGCGTGGTGCATGTCACCAGTTGGAAGGAGGTGATTTTTAACCCCTCGATGCCATATCGCTTAGCGCATACTTTGCT GGCATCGGCATTGACGGCAAGTTTTTTGATTGCTGGGATCAGTGCTTATCAAGTGCTGCGTAATGCCAAACATCAAGCCG CCAAAATGGGCTTAAAAGTGGCCGTGAGTGTGGCCGCGTTAGCGATTCCTGTACAGATCTTGGTGGGGGATTTACACGGC CTCAACACCTTAGAACATCAACCAGCGAAAATTGCGGCGATGGAGGGGGTATGGCAGACCGAGCGCGGCGCACCGCTACT GCTGTTTGCTCTGCCAAATGAAGAGACTCGCAGCAATGATTTTGCTCTTGGTATTCCGAATTTGGCCAGCTTGATTTTAA CCCATGATATGAACGGGGAAATTGTTGGACTTGATGCCTTCGCGCCAGATCATCCCCCCGTCGCACCGCTGTTTTTTGGT TTTCGCGTCATGGTGGGAGTAGGCGTACTGATGCTGTTGGTCAGTTGGTTTGGCGCTTGGCATTTATGGCGTAACAAACC GCTGCCCAAGCCCTATATGTATGCCTTAATCGGCATGACCTTTTCGGGTTGGGTCGCCACGATTGCGGGCTGGTATGTCA CGGAAATTGGTCGCCAGCCTTGGCTGGTGAGTGGCGTATTGCGAACCTCTGAAGCCGTGACCCCCGTGGCCAGTAGCTCG GTTGGGATCTCGCTGACGCTTTATCTCATCACTTATGTTGTATTGTTGGTCGCTTATGTTCACACCCTATTTTACCTTGC GCGTAAAACAGGACACGCACCGCAAGTTTCACCAAGCTCTACAAAGGCCGCGTTATGA
Upstream 100 bases:
>100_bases GCGGACTAAACCAATCCAGTGCCAATGACGTATGAGTCACTAAAGATGGTCGTTAGTGTTAACCCCATCACTGGTTTGTT TCATTTTTTGAGGAAAAGAG
Downstream 100 bases:
>100_bases TGCAGTATTTGCCAGAAATTTATTTGTTGTTGTTGGGGTTCACCGTGTTTATGTACGCGGTGTTGGATGGTTATGACTTG GGCGTAGGCATTTTACTGCC
Product: quinol oxidase, subunit I
Products: NA
Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALTFALGVVSGITMSFQFGTN WPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVI DGVVHVTSWKEVIFNPSMPYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHG LNTLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGEIVGLDAFAPDHPPVAPLFFG FRVMVGVGVLMLLVSWFGAWHLWRNKPLPKPYMYALIGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTSEAVTPVASSS VGISLTLYLITYVVLLVAYVHTLFYLARKTGHAPQVSPSSTKAAL
Sequences:
>Translated_445_residues MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALTFALGVVSGITMSFQFGTN WPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVI DGVVHVTSWKEVIFNPSMPYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHG LNTLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGEIVGLDAFAPDHPPVAPLFFG FRVMVGVGVLMLLVSWFGAWHLWRNKPLPKPYMYALIGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTSEAVTPVASSS VGISLTLYLITYVVLLVAYVHTLFYLARKTGHAPQVSPSSTKAAL >Mature_445_residues MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALTFALGVVSGITMSFQFGTN WPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVI DGVVHVTSWKEVIFNPSMPYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHG LNTLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGEIVGLDAFAPDHPPVAPLFFG FRVMVGVGVLMLLVSWFGAWHLWRNKPLPKPYMYALIGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTSEAVTPVASSS VGISLTLYLITYVVLLVAYVHTLFYLARKTGHAPQVSPSSTKAAL
Specific function: Cytochrome Oxidase Subunit. [C]
COG id: COG1271
COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]
Homologues:
Organism=Escherichia coli, GI1787212, Length=498, Percent_Identity=32.1285140562249, Blast_Score=228, Evalue=7e-61, Organism=Escherichia coli, GI87081779, Length=524, Percent_Identity=31.1068702290076, Blast_Score=204, Evalue=7e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002585 [H]
Pfam domain/function: PF01654 Bac_Ubq_Cox [H]
EC number: 1.10.3.-
Molecular weight: Translated: 49081; Mature: 49081
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFA CCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGR HHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPY CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCH RLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LNTLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGE CCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEECHHHHHHHHEECCCCC IVGLDAFAPDHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWHLWRNKPLPKPYMYALIGMT EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FSGWVATIAGWYVTEIGRQPWLVSGVLRTSEAVTPVASSSVGISLTLYLITYVVLLVAYV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH HTLFYLARKTGHAPQVSPSSTKAAL HHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFA CCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGR HHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPY CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCH RLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LNTLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGE CCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEECHHHHHHHHEECCCCC IVGLDAFAPDHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWHLWRNKPLPKPYMYALIGMT EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FSGWVATIAGWYVTEIGRQPWLVSGVLRTSEAVTPVASSSVGISLTLYLITYVVLLVAYV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH HTLFYLARKTGHAPQVSPSSTKAAL HHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]