| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is pyrG [H]
Identifier: 147675626
GI number: 147675626
Start: 2181178
End: 2182815
Strand: Reverse
Name: pyrG [H]
Synonym: VC0395_A2026
Alternate gene names: 147675626
Gene position: 2182815-2181178 (Counterclockwise)
Preceding gene: 147673315
Following gene: 147675028
Centisome position: 72.18
GC content: 49.45
Gene sequence:
>1638_bases ATGACGACAAATTATATTTTTGTTACTGGCGGGGTTGTATCCTCTCTAGGTAAAGGTATTGCAGCAGCATCCCTTGCAGC GATTCTTGAAGCTCGTGGTCTTAAAGTAACCATGATGAAGCTTGACCCTTACATCAACGTTGACCCGGGCACCATGAGTC CAACTCAACACGGTGAAGTGTTCGTTACGGAAGATGGCGCAGAAACCGACCTAGACCTTGGTCACTACGAGCGTTTCATT CGTACCAAGATGACCAAGCGCAACAACTTTACCGCAGGTCGTGTTTACGCTGATGTTCTGCGCAAAGAGCGCCGTGGCGA CTACTTAGGTGCCACGATTCAGGTTATTCCTCATATCACTAACGCGATCAAAGATCGTGTGATTGCGGGCTCAGAAGGCC ACGACATTGCTATCGTTGAAGTTGGCGGTACTGTGGGTGATATCGAATCACTGCCATTTATGGAAGCGATCCGTCAGCTT GCCATCGAAGTGGGTCGTGAGCACGCTATGTTCATGCATCTGACGCTGGTTCCTTACCTAGCGGCAGCGGGCGAAGTAAA AACGAAGCCAACCCAACACTCAGTAAAAGAGCTGCTTTCTATCGGCATTCAGCCAGACATTCTGGTTTGCCGTAGCGATC GTATGATCCCAGCCAACGAGCGTAAGAAAATTGCTCTGTTCTGTAACGTGCCTGAAAAAGCCGTTATCTCAATGAAAGAC GTGGATTCTATCTACAAGATCCCACAACTGATCCGCTCTCAAGGGTTGGATGATTTGGTGTGTGCACGTTTTGGCATTAA CGCGCCAGAAGCGGATCTCTCTGAATGGGAACAGGTGATTTACGAAGAAGCGAACCCAACCGGTGAAGTGACTATCGGTA TGGTTGGTAAGTACACTGAACTGCCAGATGCTTACAAATCGGTCAACGAAGCCCTGAAACACGCCGGTCTGAAGAACCGT CTGAGCGTGACCATCAAATACGTAGATTCACAAGACGTTGAAACCAAAGGCACCGATGTGCTCAATGGTTTGGATGCGAT TCTGGTACCGGGTGGTTTTGGCGATCGTGGTATCGAAGGCAAAATCCGTGCAGCGCAATATGCACGTGAAAACAAAATTC CTTACCTTGGCATCTGCTTGGGTATGCAAGTGGCACTCATCGAATACGCGCGCAACGTAGCGGGTATGGAAGGTGCACAC TCAACCGAATTCAATAAAAACACCAAATATCCAGTGGTTGGTTTGATCACGGAATGGGTAGATGGCGAAGGCAATGTCGA AGAGCGTAGCGAAAAATCGGATCTGGGCGGCACAATGCGTCTAGGTTCACAGCTATGCCACCTTGAGAAAGGCACTAAAG CGTACGAGTTGTACGGTAGCGCAACCATTCATGAGCGTCACCGCCACCGTTACGAAGTCAACAACCTGCTGCGTCCTCAG ATTGAAAAAGCAGGTTTGAAGGTTTCTGGTCTGTCAGCAGATAAGAAGCTGGTTGAAGTGATTGAGAACCCTGCTCACCC ATGGTTTGTGGCAGCGCAGTTCCACCCAGAGTTCACCTCAACCCCACGCGATGGTCACCCTCTGTTTGCTGGCTTTGTAA AAGCAGCGGGTCAGTTCCAACGCGGTGAATTGAAGTAA
Upstream 100 bases:
>100_bases TGTGATAGATTTCACGTTGTGGCAATGGGGGCCTTCTGGTATAGTTTCGTCCCGTCCAGAAGAAATCCATTTCCCTCATT CAACCAATTTCAGGTTAAAC
Downstream 100 bases:
>100_bases AAGGATACGGGTAGCCACTTTAGCAGTGTGGCTACCCTTTTAGTTTTGACATTTAAATTCAATTGAGAGGAAACATTAAT GTCTAAGATCGTTAAAGTTC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMTKRNNFTAGRVYADVLRKERRGDYLGATIQVIPHITNAIKDRVIAGSEGHDIAIVEVGGTVGDIESLPFMEAIRQL AIEVGREHAMFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRMIPANERKKIALFCNVPEKAVISMKD VDSIYKIPQLIRSQGLDDLVCARFGINAPEADLSEWEQVIYEEANPTGEVTIGMVGKYTELPDAYKSVNEALKHAGLKNR LSVTIKYVDSQDVETKGTDVLNGLDAILVPGGFGDRGIEGKIRAAQYARENKIPYLGICLGMQVALIEYARNVAGMEGAH STEFNKNTKYPVVGLITEWVDGEGNVEERSEKSDLGGTMRLGSQLCHLEKGTKAYELYGSATIHERHRHRYEVNNLLRPQ IEKAGLKVSGLSADKKLVEVIENPAHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGQFQRGELK
Sequences:
>Translated_545_residues MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMTKRNNFTAGRVYADVLRKERRGDYLGATIQVIPHITNAIKDRVIAGSEGHDIAIVEVGGTVGDIESLPFMEAIRQL AIEVGREHAMFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRMIPANERKKIALFCNVPEKAVISMKD VDSIYKIPQLIRSQGLDDLVCARFGINAPEADLSEWEQVIYEEANPTGEVTIGMVGKYTELPDAYKSVNEALKHAGLKNR LSVTIKYVDSQDVETKGTDVLNGLDAILVPGGFGDRGIEGKIRAAQYARENKIPYLGICLGMQVALIEYARNVAGMEGAH STEFNKNTKYPVVGLITEWVDGEGNVEERSEKSDLGGTMRLGSQLCHLEKGTKAYELYGSATIHERHRHRYEVNNLLRPQ IEKAGLKVSGLSADKKLVEVIENPAHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGQFQRGELK >Mature_544_residues TTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIR TKMTKRNNFTAGRVYADVLRKERRGDYLGATIQVIPHITNAIKDRVIAGSEGHDIAIVEVGGTVGDIESLPFMEAIRQLA IEVGREHAMFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRMIPANERKKIALFCNVPEKAVISMKDV DSIYKIPQLIRSQGLDDLVCARFGINAPEADLSEWEQVIYEEANPTGEVTIGMVGKYTELPDAYKSVNEALKHAGLKNRL SVTIKYVDSQDVETKGTDVLNGLDAILVPGGFGDRGIEGKIRAAQYARENKIPYLGICLGMQVALIEYARNVAGMEGAHS TEFNKNTKYPVVGLITEWVDGEGNVEERSEKSDLGGTMRLGSQLCHLEKGTKAYELYGSATIHERHRHRYEVNNLLRPQI EKAGLKVSGLSADKKLVEVIENPAHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGQFQRGELK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=556, Percent_Identity=43.8848920863309, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=556, Percent_Identity=43.705035971223, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI28559083, Length=556, Percent_Identity=43.705035971223, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI221316689, Length=556, Percent_Identity=43.705035971223, Blast_Score=455, Evalue=1e-128, Organism=Escherichia coli, GI1789142, Length=545, Percent_Identity=79.4495412844037, Blast_Score=897, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=38.9162561576355, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319432, Length=574, Percent_Identity=41.98606271777, Blast_Score=445, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322563, Length=565, Percent_Identity=41.2389380530973, Blast_Score=439, Evalue=1e-124, Organism=Drosophila melanogaster, GI24664469, Length=556, Percent_Identity=43.8848920863309, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI21357815, Length=502, Percent_Identity=42.4302788844622, Blast_Score=393, Evalue=1e-109,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59886; Mature: 59755
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEV CCCCEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMTKRNNFTAGRVYADVLRKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NAIKDRVIAGSEGHDIAIVEVGGTVGDIESLPFMEAIRQLAIEVGREHAMFMHLTLVPYL HHHHHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRMIPANERKKIALFCNVPEKAVISMKD HHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHEEHHH VDSIYKIPQLIRSQGLDDLVCARFGINAPEADLSEWEQVIYEEANPTGEVTIGMVGKYTE HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC LPDAYKSVNEALKHAGLKNRLSVTIKYVDSQDVETKGTDVLNGLDAILVPGGFGDRGIEG CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCCCCCCC KIRAAQYARENKIPYLGICLGMQVALIEYARNVAGMEGAHSTEFNKNTKYPVVGLITEWV CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHC DGEGNVEERSEKSDLGGTMRLGSQLCHLEKGTKAYELYGSATIHERHRHRYEVNNLLRPQ CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH IEKAGLKVSGLSADKKLVEVIENPAHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGQFQ HHHCCCEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC RGELK CCCCC >Mature Secondary Structure TTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEV CCCEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMTKRNNFTAGRVYADVLRKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NAIKDRVIAGSEGHDIAIVEVGGTVGDIESLPFMEAIRQLAIEVGREHAMFMHLTLVPYL HHHHHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRMIPANERKKIALFCNVPEKAVISMKD HHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHEEHHH VDSIYKIPQLIRSQGLDDLVCARFGINAPEADLSEWEQVIYEEANPTGEVTIGMVGKYTE HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC LPDAYKSVNEALKHAGLKNRLSVTIKYVDSQDVETKGTDVLNGLDAILVPGGFGDRGIEG CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCCCCCCC KIRAAQYARENKIPYLGICLGMQVALIEYARNVAGMEGAHSTEFNKNTKYPVVGLITEWV CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHC DGEGNVEERSEKSDLGGTMRLGSQLCHLEKGTKAYELYGSATIHERHRHRYEVNNLLRPQ CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH IEKAGLKVSGLSADKKLVEVIENPAHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGQFQ HHHCCCEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC RGELK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA