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The map label for this gene is 147675462

Identifier: 147675462

GI number: 147675462

Start: 2849353

End: 2849982

Strand: Reverse

Name: 147675462

Synonym: VC0395_A2692

Alternate gene names: NA

Gene position: 2849982-2849353 (Counterclockwise)

Preceding gene: 147673827

Following gene: 162329620

Centisome position: 94.24

GC content: 50.95

Gene sequence:

>630_bases
ATGAACTGGTTATTACGCCGTTATTGGCACGCGAAACTCAAAGGTTCTCCCTATCAACGGCTGTTTGAAACCGCGCGCCA
TCACGAGTACGTCTCGCTCGACTGTGAAACCACCAGCTTAGATCCTAAACGCGCTGAGTTAGTGACCATCGCCGCAACCA
AGATCGTTGATAACCGCATTATCACCAGTCAACCCTTTGAGGTGCGCCTGTGCGCGCCACAATCGCTCGACTCGGGTTCA
GTGCGGATTCACCGTATCCGCCACCAAGATCTGCACGATGGTCTGAGCGAAAAAGAGGCGCTTCTCCAACTGATTGAGTT
TATTGGCAATCGTCCCTTGGTCGGCTACCACATTCGTTACGATAAGACGATTTTGGATATCGCCTGTCGTAAACATCTCG
GGTTTCCACTCCCCAACCGACTGATTGAGGTGAGCCAGATCTATCACGATAAACTGGAAAAACACCTGCCCAATGCCTAT
TTCGATCTCAGTTTAGAGGCGATCTGCCGCCATCTGGATCTGCCACTGCAAGACAAACATGATGCGCTGCAAGATGCGAT
TGCCGCCGCTTTGGTGTTTGTGCGTTTAACCAAAGGCGATCTGCCACAATTTATTGCACCGGGTGTGTAA

Upstream 100 bases:

>100_bases
ACCGCACTGAACGCGATTTATTGCGCCATAGCCTGCATGTGGTGAAAAAATTTAAGCAGTGGCTCGGTTATCACTATCAA
ATTCGCGATTGAGGTGGCTG

Downstream 100 bases:

>100_bases
CGCCGAAAGTCGGCGGCGAGATCTCTCCCGCTTGTTTGCCGCTTATTCGCCTTGCACACATATCCCATCAGGCTTTCATC
CTAAAGTCTAATTGTAGAAA

Product: DNA polymerase III subunit epsilon

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Epsilon Subunit; Exonuclease RNAse T And DNA Polymerase III; Exonuclease; Exonuclease Family Protein; Exonuclease RNAase T And DNA Polymerase III; DNA Polymerase IIIsubunit Epsilon; Exonuclease Superfamily; DNA Poymerase; DNA Polymerase III PolC-Type; PAS/PAC Sensor Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGS
VRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAY
FDLSLEAICRHLDLPLQDKHDALQDAIAAALVFVRLTKGDLPQFIAPGV

Sequences:

>Translated_209_residues
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGS
VRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAY
FDLSLEAICRHLDLPLQDKHDALQDAIAAALVFVRLTKGDLPQFIAPGV
>Mature_209_residues
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGS
VRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAY
FDLSLEAICRHLDLPLQDKHDALQDAIAAALVFVRLTKGDLPQFIAPGV

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 24070; Mature: 24070

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRI
CCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHEEEHHHHHHHHCCC
ITSQPFEVRLCAPQSLDSGSVRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRY
CCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEE
DKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAYFDLSLEAICRHLDLPLQDKH
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCHH
DALQDAIAAALVFVRLTKGDLPQFIAPGV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRI
CCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHEEEHHHHHHHHCCC
ITSQPFEVRLCAPQSLDSGSVRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRY
CCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEE
DKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAYFDLSLEAICRHLDLPLQDKH
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCHH
DALQDAIAAALVFVRLTKGDLPQFIAPGV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA