Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147675444

Identifier: 147675444

GI number: 147675444

Start: 1311262

End: 1311921

Strand: Reverse

Name: 147675444

Synonym: VC0395_A1239

Alternate gene names: NA

Gene position: 1311921-1311262 (Counterclockwise)

Preceding gene: 147674586

Following gene: 147673464

Centisome position: 43.38

GC content: 46.52

Gene sequence:

>660_bases
ATGGCGAATTACCATTTAGAAATTCAAAATGTGGTCAATACTGCACTGGCAGAATTAGAGGCCGAACATAAAGCGGGCAA
GCTTGCCAATGCGCCAGTGGCTAACAACCATTTTTTAGTGCATTGGGTGACGAAAGCGCTGAAAGCACAACGTTTTCACC
GCTGCGTGGGTGATGATTTAACTCAGTGGCAGAAAGCGGGGCGCTCAAAAGGAACAGAATCACAACTGTTACCGACCTTT
CAACGCATCTCCGCGTATTACGCGCATTTTTTTGCAGAGCAAGAGCACACACCGATCACGGATAAACAAATAGAAGCGTT
TTTGGATGAGATGGAGCAAGCCGGTTGGGAAGTTTCCACCTCTGAGCCGTTAGTCAATGCAGGAAAAGTGCAGATTTTTA
CTGACGGCCAGAATTCATTGGCTCTTTGCTCTGTGCAGTGTGAAGCTTGTTTTGATGGTGAACGGTTAGTGAAACCAATG
AACTGGTTTGTGCGCGGTCACCACGCTGGCTTTATTGAGAAAGCCTTTGCGGCGGGATTTATGGTGCACAAGCAAACCGA
TTACAAATCGAATGTGAAATACCATGGTGAGTACCTGATTTTCCCCGCCAACCAAGGTACTCAGTTGGCGGAAATTCCGA
TTTCTTTTCGTGCTAACTAA

Upstream 100 bases:

>100_bases
CAGCGTTGCCGGGTACTGAAACATGGCCAATGATATTTGTGATGGCGGCTTGTTCTGTGTTATCAGGTGCCTTTTACTGG
ACGTTAGGAAGAAAAGCGTA

Downstream 100 bases:

>100_bases
CTTTTCGTGCTAACTAACTTTTCATGCTAACTAAATAGCTCAGTTAGATCAGTTTGAAAAACGGCGCTCAAAAGCCTGAC
TGAAGAAAACCTCATCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MANYHLEIQNVVNTALAELEAEHKAGKLANAPVANNHFLVHWVTKALKAQRFHRCVGDDLTQWQKAGRSKGTESQLLPTF
QRISAYYAHFFAEQEHTPITDKQIEAFLDEMEQAGWEVSTSEPLVNAGKVQIFTDGQNSLALCSVQCEACFDGERLVKPM
NWFVRGHHAGFIEKAFAAGFMVHKQTDYKSNVKYHGEYLIFPANQGTQLAEIPISFRAN

Sequences:

>Translated_219_residues
MANYHLEIQNVVNTALAELEAEHKAGKLANAPVANNHFLVHWVTKALKAQRFHRCVGDDLTQWQKAGRSKGTESQLLPTF
QRISAYYAHFFAEQEHTPITDKQIEAFLDEMEQAGWEVSTSEPLVNAGKVQIFTDGQNSLALCSVQCEACFDGERLVKPM
NWFVRGHHAGFIEKAFAAGFMVHKQTDYKSNVKYHGEYLIFPANQGTQLAEIPISFRAN
>Mature_218_residues
ANYHLEIQNVVNTALAELEAEHKAGKLANAPVANNHFLVHWVTKALKAQRFHRCVGDDLTQWQKAGRSKGTESQLLPTFQ
RISAYYAHFFAEQEHTPITDKQIEAFLDEMEQAGWEVSTSEPLVNAGKVQIFTDGQNSLALCSVQCEACFDGERLVKPMN
WFVRGHHAGFIEKAFAAGFMVHKQTDYKSNVKYHGEYLIFPANQGTQLAEIPISFRAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24682; Mature: 24551

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYHLEIQNVVNTALAELEAEHKAGKLANAPVANNHFLVHWVTKALKAQRFHRCVGDDL
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
TQWQKAGRSKGTESQLLPTFQRISAYYAHFFAEQEHTPITDKQIEAFLDEMEQAGWEVST
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
SEPLVNAGKVQIFTDGQNSLALCSVQCEACFDGERLVKPMNWFVRGHHAGFIEKAFAAGF
CCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MVHKQTDYKSNVKYHGEYLIFPANQGTQLAEIPISFRAN
HEEECCCCCCCCEECCEEEEEECCCCCEEEEECEEECCC
>Mature Secondary Structure 
ANYHLEIQNVVNTALAELEAEHKAGKLANAPVANNHFLVHWVTKALKAQRFHRCVGDDL
CCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
TQWQKAGRSKGTESQLLPTFQRISAYYAHFFAEQEHTPITDKQIEAFLDEMEQAGWEVST
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
SEPLVNAGKVQIFTDGQNSLALCSVQCEACFDGERLVKPMNWFVRGHHAGFIEKAFAAGF
CCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MVHKQTDYKSNVKYHGEYLIFPANQGTQLAEIPISFRAN
HEEECCCCCCCCEECCEEEEEECCCCCEEEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA