| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is lnt [H]
Identifier: 147675422
GI number: 147675422
Start: 512765
End: 514282
Strand: Reverse
Name: lnt [H]
Synonym: VC0395_A0480
Alternate gene names: 147675422
Gene position: 514282-512765 (Counterclockwise)
Preceding gene: 147675736
Following gene: 147673619
Centisome position: 17.01
GC content: 50.59
Gene sequence:
>1518_bases ATGAACAGCGTATTATCTCATCGCCTAATGCGGCCGCTTACGGCCGCTTTTGTTGGCGTCATAACTCCTCTGGCTTTTGC CCCGTATCAATTTTGGCCTTTGGCTCTACTCAGCCCATTTATCCTACTGCTTTTGCTCCACCAACAAAGCGCCAAGCGAG CGGCTTTGATTGCTTATCTCTGGGGGATTGGTCAATTTGCGGTGGGTATCAGTTGGGTACACGTCAGTATTGATACGTTT GGCGGCATGCCCAAAATTGCCAGCCTGTTTTTAATGACTCTATTGGTCGGCTATCTGGCACTTTATCCAAGCCTTTTCGG CTGGCTACTCAATCGCTTTTTTCCGAACAACTCACGCAGTAAATGGTTATGTGCTGCCCCAGCTTTGTGGCTGATTACCG ATTGGCTACGTGGTTGGGTGATGACGGGTTTTCCTTGGCTATGGCTCGGTTACAGTCAAATTGATAGCCCTCTTGCCAAC TTTGCCCCCGTCGGTGGCGTAGAGCTCATCACTCTGTTACTGCTGTTTTGTGCTGGTAGCTTAGCTTATGCAGTGCTTAA TCACCGTTGGTTGATGGCTTGCATCCCTCTTGTGGTTTACGCAACGGGTTATGGCCTCCAAGCCATGCAGTGGGTCACCC CACAAACGGATCGCACAGCCTCACTGGCCTTGATTCAAGGCAATATCGAACAGGGATTGAAATGGCTGCCTAGCCAGCGC TGGCCAACCATCATGAAATACACCGATCTTACTCGCGAAAACTGGGATGCCGATGTAATCATTTGGCCAGAAGCGGCGAT CCCCGCTTTTGAATATGAAATCTCCTCATTTCTGCATAATCTTGATGCTGCGGCACGTATGAACCAAAGCGCGGTGATTA CTGGCATCATCAATCAAAGTGAAGATAAGCAGTACTTCAATAGCGTGCTGACAGTCGGTGATACGCCTCATGGCGAATAC CGTTATGATCTGACCCTGCGCTACCATAAGTACCACTTGTTGCCTTTTGGCGAATTCGTGCCGTTTGAAGAGATCCTGCG TCCATTAGCTCCATTCTTTAATTTGCCGATGTCCTCCTTTAGCCAAGGGGCTTACGTGCAACCGAATTTGATTGCAAAGG GCTTCGCATTTGTCACCGCACTCTGCTACGAAATCATCTTCAATGAGCAAGTACGCGATAATGTGACGCCGGAAACCGAC TTCCTACTGACGCTTTCGAATGATGCTTGGTTTGGTCGTTCGATAGGCCCATTGCAACACATGGAAATCGCTCGCATGCG CGCCTTAGAATTGGGCAAGCCGCTGATCCGCGCCACCAACAATGGAGTGACGGCCGTCACTGACGAGCGAGGACGCATCG TAGCTCAGTTGCCACAATTTGAAACTGGCGTGCTAAAAGCAACGGTCACCCCAACTCGCGGTAGTACACCTTACTTCCTA TGGGGCACAACGCCACTCTACCTCTGGGTAGGCTTAGCGATTGGGTTCGCTTTCTGGCGCCAGCGCCGGGCTAGATAA
Upstream 100 bases:
>100_bases GTGGCTCTTCAAGTGACCGTTCCCGATCTGGAAGCCCTTTCGCACGTTGCGGAAGAGTAGTCCCCACTCTCTTACTAAGT AAGAGTAAAGAAAAGAGACG
Downstream 100 bases:
>100_bases GTAAAAGTAAAACGGGAAGTTATCTTCCCGTTTTTTATTGCAACGCTTTATCCAACTAAGGTTTCAGTGGTTGGCGGCTA AACGCTTTACCCCCACATTG
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MNSVLSHRLMRPLTAAFVGVITPLAFAPYQFWPLALLSPFILLLLLHQQSAKRAALIAYLWGIGQFAVGISWVHVSIDTF GGMPKIASLFLMTLLVGYLALYPSLFGWLLNRFFPNNSRSKWLCAAPALWLITDWLRGWVMTGFPWLWLGYSQIDSPLAN FAPVGGVELITLLLLFCAGSLAYAVLNHRWLMACIPLVVYATGYGLQAMQWVTPQTDRTASLALIQGNIEQGLKWLPSQR WPTIMKYTDLTRENWDADVIIWPEAAIPAFEYEISSFLHNLDAAARMNQSAVITGIINQSEDKQYFNSVLTVGDTPHGEY RYDLTLRYHKYHLLPFGEFVPFEEILRPLAPFFNLPMSSFSQGAYVQPNLIAKGFAFVTALCYEIIFNEQVRDNVTPETD FLLTLSNDAWFGRSIGPLQHMEIARMRALELGKPLIRATNNGVTAVTDERGRIVAQLPQFETGVLKATVTPTRGSTPYFL WGTTPLYLWVGLAIGFAFWRQRRAR
Sequences:
>Translated_505_residues MNSVLSHRLMRPLTAAFVGVITPLAFAPYQFWPLALLSPFILLLLLHQQSAKRAALIAYLWGIGQFAVGISWVHVSIDTF GGMPKIASLFLMTLLVGYLALYPSLFGWLLNRFFPNNSRSKWLCAAPALWLITDWLRGWVMTGFPWLWLGYSQIDSPLAN FAPVGGVELITLLLLFCAGSLAYAVLNHRWLMACIPLVVYATGYGLQAMQWVTPQTDRTASLALIQGNIEQGLKWLPSQR WPTIMKYTDLTRENWDADVIIWPEAAIPAFEYEISSFLHNLDAAARMNQSAVITGIINQSEDKQYFNSVLTVGDTPHGEY RYDLTLRYHKYHLLPFGEFVPFEEILRPLAPFFNLPMSSFSQGAYVQPNLIAKGFAFVTALCYEIIFNEQVRDNVTPETD FLLTLSNDAWFGRSIGPLQHMEIARMRALELGKPLIRATNNGVTAVTDERGRIVAQLPQFETGVLKATVTPTRGSTPYFL WGTTPLYLWVGLAIGFAFWRQRRAR >Mature_505_residues MNSVLSHRLMRPLTAAFVGVITPLAFAPYQFWPLALLSPFILLLLLHQQSAKRAALIAYLWGIGQFAVGISWVHVSIDTF GGMPKIASLFLMTLLVGYLALYPSLFGWLLNRFFPNNSRSKWLCAAPALWLITDWLRGWVMTGFPWLWLGYSQIDSPLAN FAPVGGVELITLLLLFCAGSLAYAVLNHRWLMACIPLVVYATGYGLQAMQWVTPQTDRTASLALIQGNIEQGLKWLPSQR WPTIMKYTDLTRENWDADVIIWPEAAIPAFEYEISSFLHNLDAAARMNQSAVITGIINQSEDKQYFNSVLTVGDTPHGEY RYDLTLRYHKYHLLPFGEFVPFEEILRPLAPFFNLPMSSFSQGAYVQPNLIAKGFAFVTALCYEIIFNEQVRDNVTPETD FLLTLSNDAWFGRSIGPLQHMEIARMRALELGKPLIRATNNGVTAVTDERGRIVAQLPQFETGVLKATVTPTRGSTPYFL WGTTPLYLWVGLAIGFAFWRQRRAR
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=510, Percent_Identity=47.6470588235294, Blast_Score=457, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 57028; Mature: 57028
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVLSHRLMRPLTAAFVGVITPLAFAPYQFWPLALLSPFILLLLLHQQSAKRAALIAYL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIGQFAVGISWVHVSIDTFGGMPKIASLFLMTLLVGYLALYPSLFGWLLNRFFPNNSRS HHHHHHHHEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KWLCAAPALWLITDWLRGWVMTGFPWLWLGYSQIDSPLANFAPVGGVELITLLLLFCAGS CEEECCHHHHHHHHHHHHHHHCCCHHHEECHHHHCCHHHHCCCCCHHHHHHHHHHHHHHH LAYAVLNHRWLMACIPLVVYATGYGLQAMQWVTPQTDRTASLALIQGNIEQGLKWLPSQR HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCHHHHHHHCCCCC WPTIMKYTDLTRENWDADVIIWPEAAIPAFEYEISSFLHNLDAAARMNQSAVITGIINQS CCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC EDKQYFNSVLTVGDTPHGEYRYDLTLRYHKYHLLPFGEFVPFEEILRPLAPFFNLPMSSF HHHHHHHHHEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHC SQGAYVQPNLIAKGFAFVTALCYEIIFNEQVRDNVTPETDFLLTLSNDAWFGRSIGPLQH CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHH MEIARMRALELGKPLIRATNNGVTAVTDERGRIVAQLPQFETGVLKATVTPTRGSTPYFL HHHHHHHHHHHCCHHHEECCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCEEE WGTTPLYLWVGLAIGFAFWRQRRAR ECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSVLSHRLMRPLTAAFVGVITPLAFAPYQFWPLALLSPFILLLLLHQQSAKRAALIAYL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIGQFAVGISWVHVSIDTFGGMPKIASLFLMTLLVGYLALYPSLFGWLLNRFFPNNSRS HHHHHHHHEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KWLCAAPALWLITDWLRGWVMTGFPWLWLGYSQIDSPLANFAPVGGVELITLLLLFCAGS CEEECCHHHHHHHHHHHHHHHCCCHHHEECHHHHCCHHHHCCCCCHHHHHHHHHHHHHHH LAYAVLNHRWLMACIPLVVYATGYGLQAMQWVTPQTDRTASLALIQGNIEQGLKWLPSQR HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCHHHHHHHCCCCC WPTIMKYTDLTRENWDADVIIWPEAAIPAFEYEISSFLHNLDAAARMNQSAVITGIINQS CCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC EDKQYFNSVLTVGDTPHGEYRYDLTLRYHKYHLLPFGEFVPFEEILRPLAPFFNLPMSSF HHHHHHHHHEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHC SQGAYVQPNLIAKGFAFVTALCYEIIFNEQVRDNVTPETDFLLTLSNDAWFGRSIGPLQH CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHH MEIARMRALELGKPLIRATNNGVTAVTDERGRIVAQLPQFETGVLKATVTPTRGSTPYFL HHHHHHHHHHHCCHHHEECCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCEEE WGTTPLYLWVGLAIGFAFWRQRRAR ECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]