| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is tonB2 [C]
Identifier: 147675420
GI number: 147675420
Start: 1210935
End: 1211555
Strand: Reverse
Name: tonB2 [C]
Synonym: VC0395_A1150
Alternate gene names: 147675420
Gene position: 1211555-1210935 (Counterclockwise)
Preceding gene: 147674469
Following gene: 147673413
Centisome position: 40.06
GC content: 52.33
Gene sequence:
>621_bases ATGGGACGCTTGATCTTAGCCAGCCCGATTGCGTTGTTAGTGACACTGGCGCTGTTTAGCTTGATGGCTTGGATGGTGGA TAACGGCGGAAAGAGCATTCCTAAACCGACTGCTGCGCTCAGCTTTACCATGGTCATGGCTGAGCAGGAGCAAGATGTAC AACGCAGACAACGTAGCGTACCAGAGCAGCCACAAGTCCCGCAGGTGCCGACACAAGCGCCTGCAAAAGCTGAACAAACG GCGGCACTCGATGTTTCAGACCTCAATCCGGTGATGGACTTAAACCTCAGTACCGCTATGGAAGGGGTCGCCGTTAACGC GCCTCAGTTTGGTGATTTCGCGGTTAACCAGCAGGTGATGCCGCTACACAGGGTTGAGCCCAACTATCCAGCGAAAGCTC TGCAACGGGGAGTGGAAGGTTACGTTATCTTGCGTTTTACCATCGATGAGTTGGGAAAAACGCGCGATATCGAAGTGGTG GATGCTAACCCGAAACGCTATTTTGAGCGTGAGGCGATGCTGGCTCTGCGTAACTGGAAATACCAGTCTAAGATAGTGGA TGGTCAACCCGTAAGCCAACCCGGACAAACGGTTCGACTGGAGTTTAAACTGAACAAATGA
Upstream 100 bases:
>100_bases AAGCTGATGAGCATGCCTTTAACGGCACCGTGGTCAAAGTGATGGATGCGGCGAAAGGCGCTGGAGTAAAAAGCATTGCA TTAGCGGCGGAGAAACCCTA
Downstream 100 bases:
>100_bases AACGACGAATCTTAAGTTATCTCTTGCTGTCTTGCCTATCCGTGACGACTTACGCCGCGGAGCTGACACCGTACACGGCC AGTAAAGTGGTGAAAGCGAA
Product: tonB2 protein
Products: NA
Alternate protein names: NB2 Protein; NB Protein; NB-Like Protein; Periplasmic Protein nB; NB Domain Protein; NB Domain-Containing Protein; NB Family C-Terminal Domain Protein; NB-Like Periplasmic Protein; NB3 Protein; Protein nB; Outer Membrane Transport Energization Protein nB
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MGRLILASPIALLVTLALFSLMAWMVDNGGKSIPKPTAALSFTMVMAEQEQDVQRRQRSVPEQPQVPQVPTQAPAKAEQT AALDVSDLNPVMDLNLSTAMEGVAVNAPQFGDFAVNQQVMPLHRVEPNYPAKALQRGVEGYVILRFTIDELGKTRDIEVV DANPKRYFEREAMLALRNWKYQSKIVDGQPVSQPGQTVRLEFKLNK
Sequences:
>Translated_206_residues MGRLILASPIALLVTLALFSLMAWMVDNGGKSIPKPTAALSFTMVMAEQEQDVQRRQRSVPEQPQVPQVPTQAPAKAEQT AALDVSDLNPVMDLNLSTAMEGVAVNAPQFGDFAVNQQVMPLHRVEPNYPAKALQRGVEGYVILRFTIDELGKTRDIEVV DANPKRYFEREAMLALRNWKYQSKIVDGQPVSQPGQTVRLEFKLNK >Mature_205_residues GRLILASPIALLVTLALFSLMAWMVDNGGKSIPKPTAALSFTMVMAEQEQDVQRRQRSVPEQPQVPQVPTQAPAKAEQTA ALDVSDLNPVMDLNLSTAMEGVAVNAPQFGDFAVNQQVMPLHRVEPNYPAKALQRGVEGYVILRFTIDELGKTRDIEVVD ANPKRYFEREAMLALRNWKYQSKIVDGQPVSQPGQTVRLEFKLNK
Specific function: Interacts With Outer Membrane Receptor Proteins That Carry Out High-Affinity Binding And Energy Dependent Uptake Into The Periplasmic Space Of Specific Substrates Such As Cobalamin, And Various Iron Compounds (Such As Iron Dicitrate, Enterochelin, Aerobac
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Periplasmic Protein. Anchored To The Cytoplasm Membrane VIa Its N-Terminal Signal-Like Sequence, Spans The Periplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22901; Mature: 22770
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLILASPIALLVTLALFSLMAWMVDNGGKSIPKPTAALSFTMVMAEQEQDVQRRQRSV CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHCC PEQPQVPQVPTQAPAKAEQTAALDVSDLNPVMDLNLSTAMEGVAVNAPQFGDFAVNQQVM CCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCHHHHHCCEEECCCCCCCEECCCCCC PLHRVEPNYPAKALQRGVEGYVILRFTIDELGKTRDIEVVDANPKRYFEREAMLALRNWK CHHCCCCCCCHHHHHCCCCEEEEEEEEHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCC YQSKIVDGQPVSQPGQTVRLEFKLNK HHHEECCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure GRLILASPIALLVTLALFSLMAWMVDNGGKSIPKPTAALSFTMVMAEQEQDVQRRQRSV CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHCC PEQPQVPQVPTQAPAKAEQTAALDVSDLNPVMDLNLSTAMEGVAVNAPQFGDFAVNQQVM CCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCHHHHHCCEEECCCCCCCEECCCCCC PLHRVEPNYPAKALQRGVEGYVILRFTIDELGKTRDIEVVDANPKRYFEREAMLALRNWK CHHCCCCCCCHHHHHCCCCEEEEEEEEHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCC YQSKIVDGQPVSQPGQTVRLEFKLNK HHHEECCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA