| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675310
Identifier: 147675310
GI number: 147675310
Start: 1173237
End: 1173713
Strand: Reverse
Name: 147675310
Synonym: VC0395_A1112
Alternate gene names: NA
Gene position: 1173713-1173237 (Counterclockwise)
Preceding gene: 147673738
Following gene: 147673626
Centisome position: 38.81
GC content: 47.8
Gene sequence:
>477_bases ATGCTGTCACCCTTAGCAAAAGCCAACCTCTGTCTTAATCTGTTCGGCTTTTTCAAAGTCCCTTTGATCTGGGCGTGTCG TCCGAAAATTCTTTCGCTAAACGATCAAGCGGTTGAGGTGCGTATCCCTCTGAAAAGACGCAATAAAAATCACCTCAATA GTATGTATTTCGGTGTACTTGCGGTGGGCGCCGATGTCGCGGGTGGTTACATGGCGATGCACAAAGCCAATCAACGCGGT AAATCGGTTTCCTTGGCGTTCAAATCGGTGAGAGGCGAATTTCACAAACGCCCAGAAGCTGCGGTGCATTTTCATTGTGT AGAAGGTGAGAAGATTGATCGCATGCTAGACGAAACAGCGCGTACCGGAGAGCGGGTTAACCAAGAAGTACACATTATTG CGACCTGTCCTACGCTGCATGGTGATGAGCCAATGGCGGAGTTTTGGTTAACCCTTTCACTGAAAATCGTTAAGTAA
Upstream 100 bases:
>100_bases GCTCAGAAAGCGTCGTGGCTCAGCATTTTGTTAACATTTGTTTGACATTTATTCGGCGATCGATTGAAGTGGTCGGACAA CTTACTATTGCGGAGTTTTT
Downstream 100 bases:
>100_bases GTGGAATAGATTCGATGTCCACAATTCGACTACGGTTCAACACGATTTTCCAGCGGTAGTAAGTCGGCTCACCTTTATGG TGTTTTTCTTTCACGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MLSPLAKANLCLNLFGFFKVPLIWACRPKILSLNDQAVEVRIPLKRRNKNHLNSMYFGVLAVGADVAGGYMAMHKANQRG KSVSLAFKSVRGEFHKRPEAAVHFHCVEGEKIDRMLDETARTGERVNQEVHIIATCPTLHGDEPMAEFWLTLSLKIVK
Sequences:
>Translated_158_residues MLSPLAKANLCLNLFGFFKVPLIWACRPKILSLNDQAVEVRIPLKRRNKNHLNSMYFGVLAVGADVAGGYMAMHKANQRG KSVSLAFKSVRGEFHKRPEAAVHFHCVEGEKIDRMLDETARTGERVNQEVHIIATCPTLHGDEPMAEFWLTLSLKIVK >Mature_158_residues MLSPLAKANLCLNLFGFFKVPLIWACRPKILSLNDQAVEVRIPLKRRNKNHLNSMYFGVLAVGADVAGGYMAMHKANQRG KSVSLAFKSVRGEFHKRPEAAVHFHCVEGEKIDRMLDETARTGERVNQEVHIIATCPTLHGDEPMAEFWLTLSLKIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17754; Mature: 17754
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPLAKANLCLNLFGFFKVPLIWACRPKILSLNDQAVEVRIPLKRRNKNHLNSMYFGVL CCCCCCHHHHHHHHHHHHHHCEEEECCCEEEECCCCEEEEEECHHHCCCHHHHHHHHHHH AVGADVAGGYMAMHKANQRGKSVSLAFKSVRGEFHKRPEAAVHFHCVEGEKIDRMLDETA HHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHH RTGERVNQEVHIIATCPTLHGDEPMAEFWLTLSLKIVK HHHHHCCCEEEEEEECCCCCCCCHHHHEEEEEEEEEEC >Mature Secondary Structure MLSPLAKANLCLNLFGFFKVPLIWACRPKILSLNDQAVEVRIPLKRRNKNHLNSMYFGVL CCCCCCHHHHHHHHHHHHHHCEEEECCCEEEECCCCEEEEEECHHHCCCHHHHHHHHHHH AVGADVAGGYMAMHKANQRGKSVSLAFKSVRGEFHKRPEAAVHFHCVEGEKIDRMLDETA HHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHH RTGERVNQEVHIIATCPTLHGDEPMAEFWLTLSLKIVK HHHHHCCCEEEEEEECCCCCCCCHHHHEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA