Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

Click here to switch to the map view.

The map label for this gene is 147675291

Identifier: 147675291

GI number: 147675291

Start: 1340835

End: 1341698

Strand: Reverse

Name: 147675291

Synonym: VC0395_A1261

Alternate gene names: NA

Gene position: 1341698-1340835 (Counterclockwise)

Preceding gene: 147673854

Following gene: 147674544

Centisome position: 44.37

GC content: 48.38

Gene sequence:

>864_bases
ATGCGTACTCGTTTTCCTGCTGAATTGCTGCTTGTTGTGACCACCCTATTAGCTGCGGGAGGCTGGGTTTTCTCGAAGCA
AGCGATTCAAGAATTGCCCCCGTTTGGCTTTATTGGCTTACGCTTTATCGCGGCCTCGCTTTGTTTGTTGCCATTTTGCT
TGAATGCGTTGAAACAAGCCTCACGGCAAGCGTGTTTACAATCGATGGGGGTCGGGGTTTTACTCGCCGCGTCACTTTTT
TGTTGGATCCATGCCATTTCAATCAGTGATACCTTGGGTGAGGGCGCGTTTATCATGAGCCTCTCTATGTTGTTTGTACC
GCTATTGGCATGGCCGATTTTCGGACAGCGACCGATTCGTGCCTTTTGGCTTTCACTGCCCGTGGCGGTCGTGGGACTAT
TCTTGTTGGCATGGAATGGCACTTGGCAATTTGCCGCGAATCAGTTGTGGTTTTTAGCGGCCTCATGTTGTTTGGCGCTG
CATTTTAACTTCAATAGCCGTTTCTCAAGCCAGCTTCCGCCTATGTTATTGACGACCTTACAATTGTTTACTGCAGGCTG
TTTGGGTATCACGTTATCTTGGTTAACTGAAAGTTGGCCTGCGACCATCAGTCTAGTGACCTGGAAGTGGTTTGCATTGA
GTGTGTTACTGGCCACTAGCTTGCGTTATTTAATGCAAACCATGGGACAAAAGAGTGCCAATCCGACGAATGCGGCGCTA
CTGATGCTGTTGGAGCCGGTGTGGACGTTAGTGTTAAGCGTGGTGATTTACCAAGAAACCATGCCATTTAACAAAATGTT
GGGCTGTGGATTTCTGTTAGCCTCTTTGCTGTTGTATCGAGTCAGCTTGCTGCGTTTGCGATAA

Upstream 100 bases:

>100_bases
TGATAGGTGAGAAGGTGCTTAAACTGGAATCGACACTGGTATGCGGCACGCTTTTCGCGCACAATCGCTGTCATAACTCT
TCTTATCAATCTTATGAAAC

Downstream 100 bases:

>100_bases
CTACGGAGCAAAGCAAAAGGCCTCATATAACACCGCCAGCATGACGCTGGCGGTGTTCGTTATACATTCAATCCAATGCG
GGTTAAGCCAATTCAGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: RhaT Protein; DMT Family Permease; DMT Superfamily Drug/Metabolite Transporter; Integral Membrane; Permease Of Drug/Metabolite Transporter; Permease DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein; Transporter EamA Family; Integral Membrane Protein Transmembrane Transporter

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRTRFPAELLLVVTTLLAAGGWVFSKQAIQELPPFGFIGLRFIAASLCLLPFCLNALKQASRQACLQSMGVGVLLAASLF
CWIHAISISDTLGEGAFIMSLSMLFVPLLAWPIFGQRPIRAFWLSLPVAVVGLFLLAWNGTWQFAANQLWFLAASCCLAL
HFNFNSRFSSQLPPMLLTTLQLFTAGCLGITLSWLTESWPATISLVTWKWFALSVLLATSLRYLMQTMGQKSANPTNAAL
LMLLEPVWTLVLSVVIYQETMPFNKMLGCGFLLASLLLYRVSLLRLR

Sequences:

>Translated_287_residues
MRTRFPAELLLVVTTLLAAGGWVFSKQAIQELPPFGFIGLRFIAASLCLLPFCLNALKQASRQACLQSMGVGVLLAASLF
CWIHAISISDTLGEGAFIMSLSMLFVPLLAWPIFGQRPIRAFWLSLPVAVVGLFLLAWNGTWQFAANQLWFLAASCCLAL
HFNFNSRFSSQLPPMLLTTLQLFTAGCLGITLSWLTESWPATISLVTWKWFALSVLLATSLRYLMQTMGQKSANPTNAAL
LMLLEPVWTLVLSVVIYQETMPFNKMLGCGFLLASLLLYRVSLLRLR
>Mature_287_residues
MRTRFPAELLLVVTTLLAAGGWVFSKQAIQELPPFGFIGLRFIAASLCLLPFCLNALKQASRQACLQSMGVGVLLAASLF
CWIHAISISDTLGEGAFIMSLSMLFVPLLAWPIFGQRPIRAFWLSLPVAVVGLFLLAWNGTWQFAANQLWFLAASCCLAL
HFNFNSRFSSQLPPMLLTTLQLFTAGCLGITLSWLTESWPATISLVTWKWFALSVLLATSLRYLMQTMGQKSANPTNAAL
LMLLEPVWTLVLSVVIYQETMPFNKMLGCGFLLASLLLYRVSLLRLR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31819; Mature: 31819

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA