| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675285
Identifier: 147675285
GI number: 147675285
Start: 638581
End: 639723
Strand: Direct
Name: 147675285
Synonym: VC0395_A0600
Alternate gene names: NA
Gene position: 638581-639723 (Clockwise)
Preceding gene: 147673325
Following gene: 147674579
Centisome position: 21.12
GC content: 46.37
Gene sequence:
>1143_bases ATGACAGTAGAAGCGATGAAAGTTGTTTGCGTCGATGACGACGATTTTATGCTCAAAGCGTTAGGACGTATGATTCGCCG CATGCGACCTGATTGGGAGATTGAGTTAGTTGAAGATGCTAACCATTGGGTGGTGGATGTAGAGCACGCGCCTAGCGTGG TGATTTCCGATCTGCTGATGCCGGGGAAAAATGGTGAAGCCTTGCTGACGGAATTACGTGCGCGTTGTCCAGAGACTATG CGGGTACTGTTAACCGGAGATACGACCCAAGAATTGCCTCGTAAAGCGCACACCTATGCGCAATTTGTGCTTCCTAAACC TTTTACTCACGAAGATTTTGAACATCTTTTCTTATGTGTCGAACGGCTGTATCGAATGCCGTTCAATATTGAATGCCGCA AGCGACTGGGGGCGTTAGAGGAAATTCCGATCCTGCCTAACTCCGTTCGTAAGTTACAACAAGTGATTGCTTCGCCAAAT TGCAGTATGGACGCGATTGCGGAAACCATAGTTCATGAGCCTGTATTGGTGGCCAAAATCATTCAAATCGCCAACTCATC CTACTTTGGTTTTCGGCGTAATACCGATTCGCTGCATGAAGCGGTTGCGCGTTTGGGCGCGGTTTTGGTGGAGTCTATCG CCATCTCTTTGCTCGCAATTCATCCCAGTAATGTGAACTCAGCGGAAGATCATCAATGGGTGGCAGATTGCGCCTTCAAA TCCAGCTCCATTGCCAGAGCATTGGTGAGAGAGTTGGGTTTTCCGCGTCAGGATCAAGACCGGATTTTTGTGGCGAATTT ACTGACCTCAATTGGCAAAATTCTGCTGCTCGAAGATGGTGCAAGTAAAAAAGAGTTTTTGGATTACTACCACTTACAGC CTGGGTATGCCGATTGTGATGTGATATCGGCATACATACTGATTATGTGGGGCTACGATATTGATATAGGGGATATCATT CTCAACCAAAGATTGACCTCGTTTAGCGGTGAGCATTTAGAGCAGCTAGGCAGTCTTTCATGTCTGGCGAATAGAATTGA AAATTGCAAGCAAATCAATGAATACCGACAGCTTGTACAAGAAGCACCAGACTCAATACAAGGTGCGCTCAAGGAACTGG AAACTCAATTTTTTCCAGCTTAG
Upstream 100 bases:
>100_bases ATAGTGACTATGTGCGGCAAGTGGAAGAATTATGCCAGCGAAGTCGCGATGTCCTTGAACAAGTCACCATCTATCTAGAA CAGCAAAAAGTGAGTAATCG
Downstream 100 bases:
>100_bases TCAGTGAAATACTGAATTTTAAGGGAGTGAGTTTATGGCGATTCGACTAACGGTAGCTGATGATTCAAAGATGTCACGCA AGTCCGTGATTAGGGCGATT
Product: response regulator
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver Protein; Metal Dependent Phosphohydrolase; Metal-Dependent Hydrolase HDOD; Two-Component System Regulatory Protein; Phosphohydrolase; Two Component Response Regulator Transcriptional Regulator; CheY-Like Receiver; CheY-Like Response Regulator; HDIG Domain Protein; HDOD Domain Family
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTVEAMKVVCVDDDDFMLKALGRMIRRMRPDWEIELVEDANHWVVDVEHAPSVVISDLLMPGKNGEALLTELRARCPETM RVLLTGDTTQELPRKAHTYAQFVLPKPFTHEDFEHLFLCVERLYRMPFNIECRKRLGALEEIPILPNSVRKLQQVIASPN CSMDAIAETIVHEPVLVAKIIQIANSSYFGFRRNTDSLHEAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVADCAFK SSSIARALVRELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCDVISAYILIMWGYDIDIGDII LNQRLTSFSGEHLEQLGSLSCLANRIENCKQINEYRQLVQEAPDSIQGALKELETQFFPA
Sequences:
>Translated_380_residues MTVEAMKVVCVDDDDFMLKALGRMIRRMRPDWEIELVEDANHWVVDVEHAPSVVISDLLMPGKNGEALLTELRARCPETM RVLLTGDTTQELPRKAHTYAQFVLPKPFTHEDFEHLFLCVERLYRMPFNIECRKRLGALEEIPILPNSVRKLQQVIASPN CSMDAIAETIVHEPVLVAKIIQIANSSYFGFRRNTDSLHEAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVADCAFK SSSIARALVRELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCDVISAYILIMWGYDIDIGDII LNQRLTSFSGEHLEQLGSLSCLANRIENCKQINEYRQLVQEAPDSIQGALKELETQFFPA >Mature_379_residues TVEAMKVVCVDDDDFMLKALGRMIRRMRPDWEIELVEDANHWVVDVEHAPSVVISDLLMPGKNGEALLTELRARCPETMR VLLTGDTTQELPRKAHTYAQFVLPKPFTHEDFEHLFLCVERLYRMPFNIECRKRLGALEEIPILPNSVRKLQQVIASPNC SMDAIAETIVHEPVLVAKIIQIANSSYFGFRRNTDSLHEAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVADCAFKS SSIARALVRELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCDVISAYILIMWGYDIDIGDIIL NQRLTSFSGEHLEQLGSLSCLANRIENCKQINEYRQLVQEAPDSIQGALKELETQFFPA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42951; Mature: 42820
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEAMKVVCVDDDDFMLKALGRMIRRMRPDWEIELVEDANHWVVDVEHAPSVVISDLLM CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHC PGKNGEALLTELRARCPETMRVLLTGDTTQELPRKAHTYAQFVLPKPFTHEDFEHLFLCV CCCCCHHHHHHHHHHCHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ERLYRMPFNIECRKRLGALEEIPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKI HHHHHCCCCEEHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH IQIANSSYFGFRRNTDSLHEAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVADCAFK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHC SSSIARALVRELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCD HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCHHH VISAYILIMWGYDIDIGDIILNQRLTSFSGEHLEQLGSLSCLANRIENCKQINEYRQLVQ HHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAPDSIQGALKELETQFFPA HCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVEAMKVVCVDDDDFMLKALGRMIRRMRPDWEIELVEDANHWVVDVEHAPSVVISDLLM CCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHC PGKNGEALLTELRARCPETMRVLLTGDTTQELPRKAHTYAQFVLPKPFTHEDFEHLFLCV CCCCCHHHHHHHHHHCHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ERLYRMPFNIECRKRLGALEEIPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKI HHHHHCCCCEEHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH IQIANSSYFGFRRNTDSLHEAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVADCAFK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHC SSSIARALVRELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCD HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCHHH VISAYILIMWGYDIDIGDIILNQRLTSFSGEHLEQLGSLSCLANRIENCKQINEYRQLVQ HHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAPDSIQGALKELETQFFPA HCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA