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The map label for this gene is yoaB [C]

Identifier: 147675253

GI number: 147675253

Start: 1221323

End: 1221685

Strand: Reverse

Name: yoaB [C]

Synonym: VC0395_A1162

Alternate gene names: 147675253

Gene position: 1221685-1221323 (Counterclockwise)

Preceding gene: 147675752

Following gene: 147675741

Centisome position: 40.4

GC content: 52.07

Gene sequence:

>363_bases
ATGACAATACATCGTATTAATCCAGGCACTCGTTGGTCTGACATCACCGTGTTTAATGGCATTGCCCATTTTGTTGAAGT
CGCCGATAGCGACACGTCGGCCGATATGCAAGGCCAAGTTGAGCAGGTTCTCGCGCAAGCAGAGCGCCAATTGGCGAAGA
TTGGCAGCGATCGTTCACGCATCTTATCGGTGACGATTTATGTCACGGATTTTGCCGACCTCCCAGTGCTTAACCAAATT
TGGGATGCGTGGTTCCCAGAAGGTTGCGCCCCAAGCCGAGCGTGCGTGAAAGCGGAGCTGGCTGACCCAGACTATAAAGT
GGAAATGGCTTTTGTGGCGGCTTCGGGCGAGCAGTATCAATAA

Upstream 100 bases:

>100_bases
CAGAGCGCGATTTTACGCTTCATCTTGGCTATCCTGCTCCCCGATATAGATAAGTGAAGAGGCGACATGCTTCTTCGCGA
ATAACGTAAAAGAGAACACC

Downstream 100 bases:

>100_bases
GGAAACGCCGATGTTTATTGGTCATATCACGCAGCGCCAGTTTTGCGCTGCATTGTCACCTCAGTTGCAACGGCTGATTA
ATGAAGTATTACAGCGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTIHRINPGTRWSDITVFNGIAHFVEVADSDTSADMQGQVEQVLAQAERQLAKIGSDRSRILSVTIYVTDFADLPVLNQI
WDAWFPEGCAPSRACVKAELADPDYKVEMAFVAASGEQYQ

Sequences:

>Translated_120_residues
MTIHRINPGTRWSDITVFNGIAHFVEVADSDTSADMQGQVEQVLAQAERQLAKIGSDRSRILSVTIYVTDFADLPVLNQI
WDAWFPEGCAPSRACVKAELADPDYKVEMAFVAASGEQYQ
>Mature_119_residues
TIHRINPGTRWSDITVFNGIAHFVEVADSDTSADMQGQVEQVLAQAERQLAKIGSDRSRILSVTIYVTDFADLPVLNQIW
DAWFPEGCAPSRACVKAELADPDYKVEMAFVAASGEQYQ

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=42.1052631578947, Blast_Score=90, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13292; Mature: 13161

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHRINPGTRWSDITVFNGIAHFVEVADSDTSADMQGQVEQVLAQAERQLAKIGSDRSR
CEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
ILSVTIYVTDFADLPVLNQIWDAWFPEGCAPSRACVKAELADPDYKVEMAFVAASGEQYQ
EEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHEEEECCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
TIHRINPGTRWSDITVFNGIAHFVEVADSDTSADMQGQVEQVLAQAERQLAKIGSDRSR
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
ILSVTIYVTDFADLPVLNQIWDAWFPEGCAPSRACVKAELADPDYKVEMAFVAASGEQYQ
EEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHEEEECCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA