| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675241
Identifier: 147675241
GI number: 147675241
Start: 807502
End: 807612
Strand: Reverse
Name: 147675241
Synonym: VC0395_A0797
Alternate gene names: NA
Gene position: 807612-807502 (Counterclockwise)
Preceding gene: 147675396
Following gene: 147673289
Centisome position: 26.71
GC content: 45.05
Gene sequence:
>111_bases ATGTTACAAGAATTTAACCCAAACCATAAACCCAATTTCAGTCCAGCGGATGCTGAACTGGCTTGGTGGCGCACTTGGAC AAGTTCTTGGTGGGCTCACGTGTATTTCTAA
Upstream 100 bases:
>100_bases AATTCTCATATTTTTTATTTGCCTGATTTTTAGGCTTGACTTTTTATCGCCGCACTAGTTAACTAGTACGCAAATGCAAG ACTCTCTGTTAGGGCTCACT
Downstream 100 bases:
>100_bases GTTTAGATACTCACACACCTAGCCCGCCAACTTGAGCGGGCTTTTTATTGGTTTTTTCCACCTATCACTGCTGTTTCGCT ACTTTCTCAACGCGGTGATC
Product: putative trp operon leader peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 36
Protein sequence:
>36_residues MLQEFNPNHKPNFSPADAELAWWRTWTSSWWAHVYF
Sequences:
>Translated_36_residues MLQEFNPNHKPNFSPADAELAWWRTWTSSWWAHVYF >Mature_36_residues MLQEFNPNHKPNFSPADAELAWWRTWTSSWWAHVYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4452; Mature: 4452
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQEFNPNHKPNFSPADAELAWWRTWTSSWWAHVYF CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC >Mature Secondary Structure MLQEFNPNHKPNFSPADAELAWWRTWTSSWWAHVYF CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA