| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675224
Identifier: 147675224
GI number: 147675224
Start: 1203696
End: 1204127
Strand: Reverse
Name: 147675224
Synonym: VC0395_A1143
Alternate gene names: NA
Gene position: 1204127-1203696 (Counterclockwise)
Preceding gene: 147674166
Following gene: 147674542
Centisome position: 39.82
GC content: 43.29
Gene sequence:
>432_bases TTGCCATCTGTGAAAATGGCTATTCATGTCTTAGTATTAAACAAGATACAAACTAACTGGCGAACAGCAGCAGTAAAGCG GAGAAAGAATGTGGTTGTAGAAACCGATGGATATCTGGCCCTGATTGAACATCTGTCATTCAATATGGATGTTTTCACTC AGGAAGGGGATACGGGAACTGAAAGTGTTGAAGATGTCATCACAGATATGGTGGCAAGCAACATCATGTCTATTTTTGAA CAAAACCCTGAGCTTCATTCTAGTGTTCGCTTCCAATTACTGAAAGAAGCCGATTCGGTGGTCGAAGACTTAGGCGAAGT GTTAGCGGGGGTTTGGTATCGCCCCGCGACTAATGAGCAGATCGCCTTTTTGGATGAATACATCGCCCTAGTGAAAAACT TGTTTGACTCAGCCGTTGCGAAATACGACTAA
Upstream 100 bases:
>100_bases GAATAATGGGATAAAACTCATCTCAGTCAGTTTTAGCTCATAATTAAGCCGTACTAAGCGAAATAATCGAACTCTTGGTG GAAAGTGCAGCAACTAGCAT
Downstream 100 bases:
>100_bases CCCCATTCATTAGTTTGACAACAAAGGCGGATTCTCAATCCGCCTAAAATGCCAAAATTTTGAAGCCCAGTAAGGGTTAT CCATTCTCGAAATGATCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPSVKMAIHVLVLNKIQTNWRTAAVKRRKNVVVETDGYLALIEHLSFNMDVFTQEGDTGTESVEDVITDMVASNIMSIFE QNPELHSSVRFQLLKEADSVVEDLGEVLAGVWYRPATNEQIAFLDEYIALVKNLFDSAVAKYD
Sequences:
>Translated_143_residues MPSVKMAIHVLVLNKIQTNWRTAAVKRRKNVVVETDGYLALIEHLSFNMDVFTQEGDTGTESVEDVITDMVASNIMSIFE QNPELHSSVRFQLLKEADSVVEDLGEVLAGVWYRPATNEQIAFLDEYIALVKNLFDSAVAKYD >Mature_142_residues PSVKMAIHVLVLNKIQTNWRTAAVKRRKNVVVETDGYLALIEHLSFNMDVFTQEGDTGTESVEDVITDMVASNIMSIFEQ NPELHSSVRFQLLKEADSVVEDLGEVLAGVWYRPATNEQIAFLDEYIALVKNLFDSAVAKYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16109; Mature: 15977
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVKMAIHVLVLNKIQTNWRTAAVKRRKNVVVETDGYLALIEHLSFNMDVFTQEGDTGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEECCCCCCH ESVEDVITDMVASNIMSIFEQNPELHSSVRFQLLKEADSVVEDLGEVLAGVWYRPATNEQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IAFLDEYIALVKNLFDSAVAKYD HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSVKMAIHVLVLNKIQTNWRTAAVKRRKNVVVETDGYLALIEHLSFNMDVFTQEGDTGT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEECCCCCCH ESVEDVITDMVASNIMSIFEQNPELHSSVRFQLLKEADSVVEDLGEVLAGVWYRPATNEQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IAFLDEYIALVKNLFDSAVAKYD HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA