| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147675216
Identifier: 147675216
GI number: 147675216
Start: 1196898
End: 1197278
Strand: Reverse
Name: 147675216
Synonym: VC0395_A1135
Alternate gene names: NA
Gene position: 1197278-1196898 (Counterclockwise)
Preceding gene: 147673565
Following gene: 147675634
Centisome position: 39.59
GC content: 39.9
Gene sequence:
>381_bases TTGGATTGGGATGGAGAGAAAATTTTGAATACCGAACAACAAGTCGGTGCTCACTTAGGATTTTCGATTGTGAATGAGTT GAAGAAAAAACAATTGAATGTTCAAGAAGTCACCACCACAGAACAACTTTTCCAAATGTTACAACTGGGTCGCTTACCTG TTGTCGCCGTTCAAGATACTACCGCTCAGCAGTTTCTCAGTAGTAAAAAAATCAAAAACATCACGAAAGTAGAACCTGCA ATCACCACCAAAGATTACTACTTAGTGTTTAGTCACCAATTTTATGATGCGAATGCAGAGATTGCAGAACAGATATGGCG AGAAATTGGAGCACTCAGAGAGGAGGCTCACTCAAAGCATGGAGGTAAATATCTTGAGTGA
Upstream 100 bases:
>100_bases AGCTCAGTATGCTCGTTATCCAATGCAAGATGATAGTCCGGATAGCCAAAAACGGATTGCCACGATCGGTTATTACTTTT ACACGCTTCAAGATCAGAAA
Downstream 100 bases:
>100_bases TGATGGATGTTCTTGATTGCCGCTTTTGGTAAAGAGTCCCTATATTGACGTCATACTATGAAGAGAAGCAAGTATAGGGA GTGAACACACTAGATTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MDWDGEKILNTEQQVGAHLGFSIVNELKKKQLNVQEVTTTEQLFQMLQLGRLPVVAVQDTTAQQFLSSKKIKNITKVEPA ITTKDYYLVFSHQFYDANAEIAEQIWREIGALREEAHSKHGGKYLE
Sequences:
>Translated_126_residues MDWDGEKILNTEQQVGAHLGFSIVNELKKKQLNVQEVTTTEQLFQMLQLGRLPVVAVQDTTAQQFLSSKKIKNITKVEPA ITTKDYYLVFSHQFYDANAEIAEQIWREIGALREEAHSKHGGKYLE >Mature_126_residues MDWDGEKILNTEQQVGAHLGFSIVNELKKKQLNVQEVTTTEQLFQMLQLGRLPVVAVQDTTAQQFLSSKKIKNITKVEPA ITTKDYYLVFSHQFYDANAEIAEQIWREIGALREEAHSKHGGKYLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14436; Mature: 14436
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWDGEKILNTEQQVGAHLGFSIVNELKKKQLNVQEVTTTEQLFQMLQLGRLPVVAVQDT CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCH TAQQFLSSKKIKNITKVEPAITTKDYYLVFSHQFYDANAEIAEQIWREIGALREEAHSKH HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC GGKYLE CCCCCC >Mature Secondary Structure MDWDGEKILNTEQQVGAHLGFSIVNELKKKQLNVQEVTTTEQLFQMLQLGRLPVVAVQDT CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCH TAQQFLSSKKIKNITKVEPAITTKDYYLVFSHQFYDANAEIAEQIWREIGALREEAHSKH HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC GGKYLE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA