Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

Click here to switch to the map view.

The map label for this gene is 147675186

Identifier: 147675186

GI number: 147675186

Start: 38638

End: 38784

Strand: Reverse

Name: 147675186

Synonym: VC0395_A0041

Alternate gene names: NA

Gene position: 38784-38638 (Counterclockwise)

Preceding gene: 147673361

Following gene: 147675633

Centisome position: 1.28

GC content: 41.5

Gene sequence:

>147_bases
TTGCCACCCACCAATATTTCAGCGATATCTAACCCATCACGCCAAGGTGCTTCATCTTGGCGTGACCCATCAAACATTTC
TGGAATCAAAATAAAATGCTATCGAGTCAAAATTTCCTCTCAATATCGCCAGTTTGATACTGACTAG

Upstream 100 bases:

>100_bases
TTCAATAACGCACTAGATGGCTTGATCGTAGTTGATCTTCGCAATGTGCCCACGAAAACCTTAGCGCGTTACATGGGGCA
ATCTGAAGCTCTGCGCTATC

Downstream 100 bases:

>100_bases
TCATTGGTATCATGCTTCATTTACACGCAAAGTTAGTATTTCAGACTAAAACACTCCTCCCCTTCTGCCACCCTTGATGA
TTGACTCTTTTTTCAGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MPPTNISAISNPSRQGASSWRDPSNISGIKIKCYRVKISSQYRQFDTD

Sequences:

>Translated_48_residues
MPPTNISAISNPSRQGASSWRDPSNISGIKIKCYRVKISSQYRQFDTD
>Mature_47_residues
PPTNISAISNPSRQGASSWRDPSNISGIKIKCYRVKISSQYRQFDTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5402; Mature: 5271

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPTNISAISNPSRQGASSWRDPSNISGIKIKCYRVKISSQYRQFDTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
PPTNISAISNPSRQGASSWRDPSNISGIKIKCYRVKISSQYRQFDTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA