| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is gshA
Identifier: 147675148
GI number: 147675148
Start: 80869
End: 82443
Strand: Direct
Name: gshA
Synonym: VC0395_A0090
Alternate gene names: 147675148
Gene position: 80869-82443 (Clockwise)
Preceding gene: 147673676
Following gene: 147674316
Centisome position: 2.67
GC content: 50.29
Gene sequence:
>1575_bases TTGAGTAAATTTGCCGAGCGACTACAAACAGTTGCAAACAAACCAGAAGTATTTCAAAAGTTTAGCCGTGGATTGGAGCG CGAATCGCTGCGTTACACGCCGGAAGGTGCTCTCACGCAAACGCCACACCCGAAAGCACTGGGAGCGGCATTAACTCACC GTTGGATCACCACAGATTTTGCGGAGTCCTTGCTGGAGTTCATCACCCCTGTCTCGCATGAAGTCGATACTCTGCTGGCG CAGATGTCGGATATTCACCATTTCGCGCAGACCAAGCTGGGCGATGAAAAACTTTGGCCTCTCTCCATGCCTTGCTACGT TGGCAGTGAAGAGGGGATAGTGCTGGCACAATACGGTTCGTCGAACACTGGAAAAATGAAAACCTTGTACCGTGAAGGGC TCAAGCGTCGTTATGGCAGCCTGATGCAGATTATTTCCGGAGTACATTTCAATTTTTCATTCCCAGAAAGTTTCTGGGAT GCCTTGTTTGGTGAGCAAGAAGAGTCTGCTCGTCAAGCGAGTAAATCTGCGGCCTATTTTGGTGTCATTCGTAATTACTA CCGTTTTGGTTGGCTGATCCCGTATCTGTTTGGCGCTTCCCCCGCACTCTGCTCATCTTTTTTACAAGGTCGCAAAACCG ATCTGCCGTTCGAGTCCATTGGTAAAACCTTGTATCTGCCTTATGCCACCTCGCTGCGTCTAAGCGATTTGGGCTACACC AACAGCGCGCAAAGTGTGCTGCAAATTGGTTTCAATAGCATAGAGCAGTATCTGCAAGGGTTGAATGAAGCGATCCGCAC CCCCTCAGCCGAGTTTGCCAAACTGGGTGTGAAAGTAGAGGGAGAATATCGCCAGCTCAATAGCAACGTACTGCAAATTG AAAATGAGCTGTATGCGCCGATTCGTCCGAAACGTGTGACACAAAGTGGCGAGCGGCCTTCGCAAGCCCTAGCGCGTGCA GGGGTGGAATATATTGAAGTGCGCTCGCTCGATGTGAACCCATTTAGCCCGATTGGAATTAATGAAGATCAGGTTCGTTT CCTCGACCTATTCTTAGCATGGACAGCGCTGTCAGATTCTGATCCTATGGATGGCTGTGAACTGGCTTGTTGGCGCGACA ACTGGCGTAAAGTGGTACTGGAAGGTCGCAAGCCTGGCTTAGAACTGCAAATTGGCTGCCATGGTGAAGTGTTGACCTTG CAAGCGTGGGCGAAGCGTGTGTTTGCCGATCTGCGTGTGATTGCTGAAACTATGGATGCGGCTCTCGGCGGCGATGCCTA CCAAGCGGTGTGTGCCAAACTAGAGACTTGGATCGAAAATCCTGAGCTGACGCTCTCGGCACAAATCCTAGCAGAAATTA AACAGCACGGCGGCTTAGGTAAAACAGGCTGCGCGTTAGGTAACGAGTACCGAGCGGTCAATTTACAGCACCAATACCAG TTCTACTCACAAGATGAGATGGAGCAGGAAGTGCGCCGCTCAACTCAAGCCCAAGCCGACATTGAAGCGAAAGAGACGCT CAATTTTGATGCTTACCTAACGCAATATTTTGCCTACCTACAGGCGGTGAGTTAA
Upstream 100 bases:
>100_bases AATAGTGGGGCGGATTGCGCCCCAAACTCGCTATGCTGCTTAAGCACTACGCTTAACAGGCGGCGTGCGACTGGAACCAC CTACATAAGCGAAGCGTATT
Downstream 100 bases:
>100_bases TTTAGTTTTAGTGGTGCGCAGTAAGCGAGCCAGAAAGGGAGAAAGGAAATGCCATTATTAGACAGTTTTACCGTCGATCA TACTCGTATGAATGCACCGG
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: Gamma-ECS; GCS; Gamma-glutamylcysteine synthetase
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MSKFAERLQTVANKPEVFQKFSRGLERESLRYTPEGALTQTPHPKALGAALTHRWITTDFAESLLEFITPVSHEVDTLLA QMSDIHHFAQTKLGDEKLWPLSMPCYVGSEEGIVLAQYGSSNTGKMKTLYREGLKRRYGSLMQIISGVHFNFSFPESFWD ALFGEQEESARQASKSAAYFGVIRNYYRFGWLIPYLFGASPALCSSFLQGRKTDLPFESIGKTLYLPYATSLRLSDLGYT NSAQSVLQIGFNSIEQYLQGLNEAIRTPSAEFAKLGVKVEGEYRQLNSNVLQIENELYAPIRPKRVTQSGERPSQALARA GVEYIEVRSLDVNPFSPIGINEDQVRFLDLFLAWTALSDSDPMDGCELACWRDNWRKVVLEGRKPGLELQIGCHGEVLTL QAWAKRVFADLRVIAETMDAALGGDAYQAVCAKLETWIENPELTLSAQILAEIKQHGGLGKTGCALGNEYRAVNLQHQYQ FYSQDEMEQEVRRSTQAQADIEAKETLNFDAYLTQYFAYLQAVS
Sequences:
>Translated_524_residues MSKFAERLQTVANKPEVFQKFSRGLERESLRYTPEGALTQTPHPKALGAALTHRWITTDFAESLLEFITPVSHEVDTLLA QMSDIHHFAQTKLGDEKLWPLSMPCYVGSEEGIVLAQYGSSNTGKMKTLYREGLKRRYGSLMQIISGVHFNFSFPESFWD ALFGEQEESARQASKSAAYFGVIRNYYRFGWLIPYLFGASPALCSSFLQGRKTDLPFESIGKTLYLPYATSLRLSDLGYT NSAQSVLQIGFNSIEQYLQGLNEAIRTPSAEFAKLGVKVEGEYRQLNSNVLQIENELYAPIRPKRVTQSGERPSQALARA GVEYIEVRSLDVNPFSPIGINEDQVRFLDLFLAWTALSDSDPMDGCELACWRDNWRKVVLEGRKPGLELQIGCHGEVLTL QAWAKRVFADLRVIAETMDAALGGDAYQAVCAKLETWIENPELTLSAQILAEIKQHGGLGKTGCALGNEYRAVNLQHQYQ FYSQDEMEQEVRRSTQAQADIEAKETLNFDAYLTQYFAYLQAVS >Mature_523_residues SKFAERLQTVANKPEVFQKFSRGLERESLRYTPEGALTQTPHPKALGAALTHRWITTDFAESLLEFITPVSHEVDTLLAQ MSDIHHFAQTKLGDEKLWPLSMPCYVGSEEGIVLAQYGSSNTGKMKTLYREGLKRRYGSLMQIISGVHFNFSFPESFWDA LFGEQEESARQASKSAAYFGVIRNYYRFGWLIPYLFGASPALCSSFLQGRKTDLPFESIGKTLYLPYATSLRLSDLGYTN SAQSVLQIGFNSIEQYLQGLNEAIRTPSAEFAKLGVKVEGEYRQLNSNVLQIENELYAPIRPKRVTQSGERPSQALARAG VEYIEVRSLDVNPFSPIGINEDQVRFLDLFLAWTALSDSDPMDGCELACWRDNWRKVVLEGRKPGLELQIGCHGEVLTLQ AWAKRVFADLRVIAETMDAALGGDAYQAVCAKLETWIENPELTLSAQILAEIKQHGGLGKTGCALGNEYRAVNLQHQYQF YSQDEMEQEVRRSTQAQADIEAKETLNFDAYLTQYFAYLQAVS
Specific function: Glutathione biosynthesis; first step. [C]
COG id: COG2918
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1789044, Length=517, Percent_Identity=54.7388781431335, Blast_Score=587, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSH1_VIBCH (Q9KUG5)
Other databases:
- EMBL: AE003852 - PIR: E82309 - RefSeq: NP_230207.1 - ProteinModelPortal: Q9KUG5 - SMR: Q9KUG5 - GeneID: 2615233 - GenomeReviews: AE003852_GR - KEGG: vch:VC0556 - TIGR: VC_0556 - HOGENOM: HBG289023 - OMA: FGLIRNY - ProtClustDB: PRK02107 - BRENDA: 6.3.2.2 - HAMAP: MF_00578 - InterPro: IPR007370 - InterPro: IPR006334 - TIGRFAMs: TIGR01434
Pfam domain/function: PF04262 Glu_cys_ligase
EC number: =6.3.2.2
Molecular weight: Translated: 58961; Mature: 58830
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFAERLQTVANKPEVFQKFSRGLERESLRYTPEGALTQTPHPKALGAALTHRWITTDF CCHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AESLLEFITPVSHEVDTLLAQMSDIHHFAQTKLGDEKLWPLSMPCYVGSEEGIVLAQYGS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCC SNTGKMKTLYREGLKRRYGSLMQIISGVHFNFSFPESFWDALFGEQEESARQASKSAAYF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH GVIRNYYRFGWLIPYLFGASPALCSSFLQGRKTDLPFESIGKTLYLPYATSLRLSDLGYT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCEEECCCCCC NSAQSVLQIGFNSIEQYLQGLNEAIRTPSAEFAKLGVKVEGEYRQLNSNVLQIENELYAP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCHHHHHCCCCEEECHHHCCC IRPKRVTQSGERPSQALARAGVEYIEVRSLDVNPFSPIGINEDQVRFLDLFLAWTALSDS CCCHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DPMDGCELACWRDNWRKVVLEGRKPGLELQIGCHGEVLTLQAWAKRVFADLRVIAETMDA CCCCCCEEEEEHHCCHHEEECCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH ALGGDAYQAVCAKLETWIENPELTLSAQILAEIKQHGGLGKTGCALGNEYRAVNLQHQYQ HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEHHHHH FYSQDEMEQEVRRSTQAQADIEAKETLNFDAYLTQYFAYLQAVS HCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SKFAERLQTVANKPEVFQKFSRGLERESLRYTPEGALTQTPHPKALGAALTHRWITTDF CHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AESLLEFITPVSHEVDTLLAQMSDIHHFAQTKLGDEKLWPLSMPCYVGSEEGIVLAQYGS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCC SNTGKMKTLYREGLKRRYGSLMQIISGVHFNFSFPESFWDALFGEQEESARQASKSAAYF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH GVIRNYYRFGWLIPYLFGASPALCSSFLQGRKTDLPFESIGKTLYLPYATSLRLSDLGYT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCEEECCCCCC NSAQSVLQIGFNSIEQYLQGLNEAIRTPSAEFAKLGVKVEGEYRQLNSNVLQIENELYAP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCHHHHHCCCCEEECHHHCCC IRPKRVTQSGERPSQALARAGVEYIEVRSLDVNPFSPIGINEDQVRFLDLFLAWTALSDS CCCHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DPMDGCELACWRDNWRKVVLEGRKPGLELQIGCHGEVLTLQAWAKRVFADLRVIAETMDA CCCCCCEEEEEHHCCHHEEECCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH ALGGDAYQAVCAKLETWIENPELTLSAQILAEIKQHGGLGKTGCALGNEYRAVNLQHQYQ HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEHHHHH FYSQDEMEQEVRRSTQAQADIEAKETLNFDAYLTQYFAYLQAVS HCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301