| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675133
Identifier: 147675133
GI number: 147675133
Start: 1268254
End: 1269057
Strand: Reverse
Name: 147675133
Synonym: VC0395_A1206
Alternate gene names: NA
Gene position: 1269057-1268254 (Counterclockwise)
Preceding gene: 147674998
Following gene: 147674541
Centisome position: 41.97
GC content: 44.28
Gene sequence:
>804_bases ATGCGCATATCTTGGTTATCCATTCTCCTATGGTTCTCGACAAGTGCTTTTGCTAACCATCAAACCATTACTTTGGTTTT AGCGGCACAAAACGATAACGGGCATGCCTATTATCATGAGTTGTTGGCTCGTGCTTTAGCCGATCAAGGCATCTCTCTAG TGGTGGAAACGCCATATACTCATTTGCCGCAGAAACGAGTGGTGAAAATGGTTGAAAACAATCAACTGTCACTCACTTGG TTATTGGAAACCCCAGAGCGCAATAAAAAGTTTGTTCATGTCGATGTGCCCCTAACCAATGGTTTGATAGGGCAACGCAT TTTATTAATTCCGCCCAGCTTACAAAGCCGTTTAGATAAAGTCTCTAACCTAAATGAATTTCGTCAAACACGGCTGGTGG CTGGGCTAGGTGAGGGATGGCTGGATGTTGCCGTCTGGCGCTCCAACCATTTACCTTTTTATATCCAAAATGGAGAGTGG CGTGGCCTATACAAAAAGCTTTCTGTCTCGGGGGCGGTGAACTACTTCCCGCGCGGTGTGACTGAAATCTATCAAGAATC CATTCTCAATCCGCATTTAGCGATAGAGCAGCATCTATTATTTCAATATCAGCGAGATTTTAAATTTTACCTCAGCCCTC AAGCTGCTCAGTATCAAGCACTATTGGAACAAGCATTGAAGGCGGCACAAGAGTCCGGCTTAATGCGTGAACTAACCGAG AAGTATTGGGGAGAATCGCTCTCCTTATTAAGGCTTGATCAAAGACAGGTGATTGAGTTGCAGGTACCTGTTGAAGATAA ATAA
Upstream 100 bases:
>100_bases GAGCGAGAATGTCGCCATCACTCATGTGTTCTACAGTAAAGAATAATCTGTATCTTGCTGGCAGATGAAAGGTAGAAGAT GAAGTCGCAGTGGAGGCGAT
Downstream 100 bases:
>100_bases CCCGTGTTTCCCTAACCACTTTATTTTCCGCACAAAATCAGCAATAGAAACTGGTTTTTCAGTACAACATCAGTTATCAA TGACACTAATTCTTTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRISWLSILLWFSTSAFANHQTITLVLAAQNDNGHAYYHELLARALADQGISLVVETPYTHLPQKRVVKMVENNQLSLTW LLETPERNKKFVHVDVPLTNGLIGQRILLIPPSLQSRLDKVSNLNEFRQTRLVAGLGEGWLDVAVWRSNHLPFYIQNGEW RGLYKKLSVSGAVNYFPRGVTEIYQESILNPHLAIEQHLLFQYQRDFKFYLSPQAAQYQALLEQALKAAQESGLMRELTE KYWGESLSLLRLDQRQVIELQVPVEDK
Sequences:
>Translated_267_residues MRISWLSILLWFSTSAFANHQTITLVLAAQNDNGHAYYHELLARALADQGISLVVETPYTHLPQKRVVKMVENNQLSLTW LLETPERNKKFVHVDVPLTNGLIGQRILLIPPSLQSRLDKVSNLNEFRQTRLVAGLGEGWLDVAVWRSNHLPFYIQNGEW RGLYKKLSVSGAVNYFPRGVTEIYQESILNPHLAIEQHLLFQYQRDFKFYLSPQAAQYQALLEQALKAAQESGLMRELTE KYWGESLSLLRLDQRQVIELQVPVEDK >Mature_267_residues MRISWLSILLWFSTSAFANHQTITLVLAAQNDNGHAYYHELLARALADQGISLVVETPYTHLPQKRVVKMVENNQLSLTW LLETPERNKKFVHVDVPLTNGLIGQRILLIPPSLQSRLDKVSNLNEFRQTRLVAGLGEGWLDVAVWRSNHLPFYIQNGEW RGLYKKLSVSGAVNYFPRGVTEIYQESILNPHLAIEQHLLFQYQRDFKFYLSPQAAQYQALLEQALKAAQESGLMRELTE KYWGESLSLLRLDQRQVIELQVPVEDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30780; Mature: 30780
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISWLSILLWFSTSAFANHQTITLVLAAQNDNGHAYYHELLARALADQGISLVVETPYT CCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC HLPQKRVVKMVENNQLSLTWLLETPERNKKFVHVDVPLTNGLIGQRILLIPPSLQSRLDK CCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHH VSNLNEFRQTRLVAGLGEGWLDVAVWRSNHLPFYIQNGEWRGLYKKLSVSGAVNYFPRGV HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHCCCHHHCCCCH TEIYQESILNPHLAIEQHLLFQYQRDFKFYLSPQAAQYQALLEQALKAAQESGLMRELTE HHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHH KYWGESLSLLRLDQRQVIELQVPVEDK HHCCCCEEEEEECCCEEEEEECCCCCC >Mature Secondary Structure MRISWLSILLWFSTSAFANHQTITLVLAAQNDNGHAYYHELLARALADQGISLVVETPYT CCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC HLPQKRVVKMVENNQLSLTWLLETPERNKKFVHVDVPLTNGLIGQRILLIPPSLQSRLDK CCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHH VSNLNEFRQTRLVAGLGEGWLDVAVWRSNHLPFYIQNGEWRGLYKKLSVSGAVNYFPRGV HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHCCCHHHCCCCH TEIYQESILNPHLAIEQHLLFQYQRDFKFYLSPQAAQYQALLEQALKAAQESGLMRELTE HHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHH KYWGESLSLLRLDQRQVIELQVPVEDK HHCCCCEEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA