| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675098
Identifier: 147675098
GI number: 147675098
Start: 757244
End: 758752
Strand: Reverse
Name: 147675098
Synonym: VC0395_A0730
Alternate gene names: NA
Gene position: 758752-757244 (Counterclockwise)
Preceding gene: 147673374
Following gene: 147674522
Centisome position: 25.09
GC content: 49.11
Gene sequence:
>1509_bases ATGACTTCGAAAATTCCTTTTTATATTTCTGTCTTTCTGCTCTTTGCTACAGGTATCACATTGAGTGTTTTGCGCCACCA AGATTATGGTGTGCCATGGACCCCCGGCGAAACTCGTCAAGTCTGGGATATTGAAGCGAGGATCGAGTTTGCAGCGCAAG GGAAGGAGGCCAAAGTTTCCCTTGCCGCACCGCTCACGCAAGAAGGCTATACCCTGATCAACGAAACCGCGTCCTCCCCG GGCTACGGCATTTCTTACCTGAATACCGAATCAGGTCGCCGTATTGAGTGGTCGATTCGTCAGGCGAGCGGCCCGCAAAC CATCTACTACAAAGCGCAATTTCTGGTCGACCCACAAGCCAAAGCAGTACAAATTCCGCCAACACAACCGATCACAAAAC CCGCCTTTGATGGCCCCGAAGAGTCAGCGGCTATCGCCTTGATCGACAGTGCTTCGCAGCGCTCAGCAGATCACGTTACC TTTGCTCGCGAGCTGATTAAAGGACTCAACGATAGCGAGAGCCAAAACGCCTCTTTGCTGCTGAATAAAATGAGTAAAGT CGATGCCACGCAAAAACTGCTCTCTTACGCACTCGTACCCAATAAAGTGGTCGGAGTGATCCAGTTAGAAGATGGTCGCC GCCGTCAGTCGATTCAGCATATGAATGAAGTGTGGAATGGCAGCGCTTGGATCCTGTTTAATCCAGAAACAGGCACCCAA CCAACACATCCGAATCTTCTGGTGTGGGATGAATCCAACGTCTCTCTACTCGATGTGGTCGGTGGGCAAAATAGCCAAGT CATGTTCAGTATGATTTCGCAAAAAGTCTCGCCTCAACAAGCCACCGACAGCAAAGTTGAGGCAGACGGTTTACTCAATC TCTCAATCCATAGCTTGCCGCTTGAAGAGCAAGCCATGTTCAAGACCATCATGTTGATCCCGATTGGTGCCTTGATCGTG GTGTTTTTGCGCGTGATTGTCGGACTCAAAACCTCGGGGACTTTCATGCCCGTCTTGATCGCGGTGGCCTTTGTACAAAC CCAGCTCACCACGGGTATTGTCGGCTTTCTGCTGATTGTAGGCACTGGCTTAATCATTCGTAGTTACCTCTCCAAGCTCA ATCTCTTACTGGTTGCACGGATTTCAGCCGTGATCATCACCGTGATTTTGATTATTTCGGTGTTTACTGTGGTGGCGTTT AAAGTCGGTTTAACCGAAGGCTTAACCATCACTTTCTTCCCGATGATTATTCTGTCGTGGACCATTGAGCGGATGTCCAT TCTGTGGGAAGAAGAAGGCGCTAAAGAGGTGCTACTGCAAGGCGGTGGCTCACTGTTTACCGCTATTTTGATCTATCTGG CGATGACCAACACGTATGTACAACACTTAACCTTTAATTTCATTGGGTTACAGTTGGTTGTTCTCGCGGCAATCCTACTG TTGGGAACTTACACCGGTTATCGAATTTCTGAGCTACGTCGCTTCAAGCCTTTGGTGGAGGAGAAGTAA
Upstream 100 bases:
>100_bases TGACACATCCCGTGCTGCTTGGCCGCGAGTTTATCCGTGATATCGCCCTGGTCGATGTCAGTCGCAAATACATTCAGACC GAACAAAAATAGGCGAGACG
Downstream 100 bases:
>100_bases TGGGGTTCTCCTTTTCGTTCTCGGATTACACCTCCCCTTTTAAGCTACGCCGCAAAGGTATCATGGGGATGAATAAGCGT AACCACGCTTATATCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Associated HD Superfamily Hydrolase; GoNADoliberin III-Like Protein; Transglutaminase-Like; Transglutaminase Domain-Containing Protein
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MTSKIPFYISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKEAKVSLAAPLTQEGYTLINETASSP GYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQAKAVQIPPTQPITKPAFDGPEESAAIALIDSASQRSADHVT FARELIKGLNDSESQNASLLLNKMSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPETGTQ PTHPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSPQQATDSKVEADGLLNLSIHSLPLEEQAMFKTIMLIPIGALIV VFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFLLIVGTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAF KVGLTEGLTITFFPMIILSWTIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAAILL LGTYTGYRISELRRFKPLVEEK
Sequences:
>Translated_502_residues MTSKIPFYISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKEAKVSLAAPLTQEGYTLINETASSP GYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQAKAVQIPPTQPITKPAFDGPEESAAIALIDSASQRSADHVT FARELIKGLNDSESQNASLLLNKMSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPETGTQ PTHPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSPQQATDSKVEADGLLNLSIHSLPLEEQAMFKTIMLIPIGALIV VFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFLLIVGTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAF KVGLTEGLTITFFPMIILSWTIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAAILL LGTYTGYRISELRRFKPLVEEK >Mature_501_residues TSKIPFYISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKEAKVSLAAPLTQEGYTLINETASSPG YGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQAKAVQIPPTQPITKPAFDGPEESAAIALIDSASQRSADHVTF ARELIKGLNDSESQNASLLLNKMSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPETGTQP THPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSPQQATDSKVEADGLLNLSIHSLPLEEQAMFKTIMLIPIGALIVV FLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFLLIVGTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFK VGLTEGLTITFFPMIILSWTIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAAILLL GTYTGYRISELRRFKPLVEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55261; Mature: 55130
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKIPFYISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKEAKVS CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEE LAAPLTQEGYTLINETASSPGYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQA EECCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEEEECCCC KAVQIPPTQPITKPAFDGPEESAAIALIDSASQRSADHVTFARELIKGLNDSESQNASLL CEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH LNKMSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPETGTQ HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCC PTHPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSPQQATDSKVEADGLLNLSIHSLP CCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC LEEQAMFKTIMLIPIGALIVVFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFLLIV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFKVGLTEGLTITFFPMIILSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAAILL HHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTYTGYRISELRRFKPLVEEK HHCCCCCHHHHHHHHCHHHCCC >Mature Secondary Structure TSKIPFYISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKEAKVS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEE LAAPLTQEGYTLINETASSPGYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQA EECCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEEEECCCC KAVQIPPTQPITKPAFDGPEESAAIALIDSASQRSADHVTFARELIKGLNDSESQNASLL CEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH LNKMSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPETGTQ HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCC PTHPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSPQQATDSKVEADGLLNLSIHSLP CCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC LEEQAMFKTIMLIPIGALIVVFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFLLIV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFKVGLTEGLTITFFPMIILSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAAILL HHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTYTGYRISELRRFKPLVEEK HHCCCCCHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA