Click here to switch to the map view.

The map label for this gene is 147675070

Identifier: 147675070

GI number: 147675070

Start: 701512

End: 703077

Strand: Direct

Name: 147675070

Synonym: VC0395_A0673

Alternate gene names: NA

Gene position: 701512-703077 (Clockwise)

Preceding gene: 147675667

Following gene: 147673735

Centisome position: 23.2

GC content: 53.26

Gene sequence:

>1566_bases
ATGAACTATGAATTCCGCGAACAAGATGTGCTGCTGCCTTACCAGAAGCGATGGATTGCTGATGAATCTCCGCTAAAGAT
TGCGGAGAAAAGCCGCCGGACGGGTATTACTTGGGCGGAAGCGGCCGATGCTGCGCTCACGGCTTCTAAGTCAAAGGCCG
CAGGTGGCACTCACCATTTCTATGTGGGTTCCAACAAAGAGATGGCGCGCGAATTCATTGATGCGGTAGCGATGTGGGCC
AAGGCGTTTAACTATGCGGCGCAAGATGTTCAGGAAGAAGTCTTTCTCGATGACGATGGCAACAAAGAAATCTTAACCTT
TGTGGTCTATTTCGCTTCTGGCTTTAAGGTGCAAGCGTTATCCAGCAACCCTTCTAACCTGCGGGGTATGCAGGGCTGCG
TAACCATTGACGAAGCCGCATTCCATGAACGGCTTGCAGAAGTGCTCAAGGCCGCGTTGGCTTTAACCATGTGGGGCGCA
AAGGTGCGCCTTATCTCTACCCATAACGGGGTGGACAACCTATTTAACCAGCTCATTCAAGACAGCCGCGCAGGCAAGAA
GCGTTACTCGATCCATACCATCACGTTGGATGATGCCTGCCGCGATGGTCTGTATAAGCGTATCTGTCAGGTCAAAGGCA
AAACATGGACGCAAGAAGCCGAAGACCAATGGAAGCGTGACCTACTGCGTGACACCGCCACCGAAGAAGATGCGCTGGAA
GAATACTACTGTGTGCCGAAGAACGGCGGCGGCGCATACATTAGCCGTGGTCTTCGTGAGCGTGCGGCCTCTTTGGCTGA
TGCGCCCGTAATCAGCTTTACTGGCAGCGCAGCATTCAACAATGCAGGCGAAGCCGAGCGCATGCGTACTATGCAAGAGT
GGCTAGTGGAGAACGTTGGCCCACAACTGCAAGCCTTGCCTAAAGGGTTGCGCCATGCACTCGGTGAAGACTTTGCCCGT
AACGGTGACTTAACGTCGTTTGCTCCGATTACCGTCGAGACAGATACCAAGCGAACGGTTCCGTTCCTAGTCGAGCTTAA
GAACGTGCCATTCAAGCAGCAAGAGCAAGCGCTGTACTACATCTGCGATCGCCTGCCTCGCCGCGACGGCATCAAGCTCG
ATGCGCGTGGTAACGGCCAATACCTTGCCGAGCAGGCCCGATACCGTTATGGCGCGGAAGTTGAAGAGGTCATACTCTCT
GTCGCCTACTACCGTGAGAACATGCCGAAGTTCAAAGCCGCTTTCGAAGATGACGAAATAAAGCTGCCTAAGCATGAGGA
TGTGATCACCGACCTTGGGCAAATCAAAATCTATCGTGGTGTGCCTGGCATCGATGACAGCCGAACCAAAGGCAGCGATG
GTAACAAGCGCCACGGTGATAGCGCGGTGGCTATCTTCCTTGCTTATCTCGCTTCTAAAGCCGACATCACCCGTTACGAA
CTGCACACCATCAAAGCGAATGCCGATGAAACACAGCGCCGCTTCTTTGGTACAGCAGAAGAAAACAACCGATTTGACGA
CATGCCGCACGCCAGTGATCTGCGCGGCAAAGGAATTCGACTATGA

Upstream 100 bases:

>100_bases
TGCTGAAGCCGCAGAGGCCGCTGAGAAGATTGTTAAGCAAGCGGGCATTTCGGCGGATACCGCCACCGATATCAAAAACC
AAATCTTGGGGATCGCGTAA

Downstream 100 bases:

>100_bases
GTATTCAATTTCTCGACGCTCGCGGCCAGCCACTCAAAGCCGACAAAACCGTACTCGCCGAAGACATTGCCCGTGCTTAC
ACCACGGGCGTGCGCAACCC

Product: portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MNYEFREQDVLLPYQKRWIADESPLKIAEKSRRTGITWAEAADAALTASKSKAAGGTHHFYVGSNKEMAREFIDAVAMWA
KAFNYAAQDVQEEVFLDDDGNKEILTFVVYFASGFKVQALSSNPSNLRGMQGCVTIDEAAFHERLAEVLKAALALTMWGA
KVRLISTHNGVDNLFNQLIQDSRAGKKRYSIHTITLDDACRDGLYKRICQVKGKTWTQEAEDQWKRDLLRDTATEEDALE
EYYCVPKNGGGAYISRGLRERAASLADAPVISFTGSAAFNNAGEAERMRTMQEWLVENVGPQLQALPKGLRHALGEDFAR
NGDLTSFAPITVETDTKRTVPFLVELKNVPFKQQEQALYYICDRLPRRDGIKLDARGNGQYLAEQARYRYGAEVEEVILS
VAYYRENMPKFKAAFEDDEIKLPKHEDVITDLGQIKIYRGVPGIDDSRTKGSDGNKRHGDSAVAIFLAYLASKADITRYE
LHTIKANADETQRRFFGTAEENNRFDDMPHASDLRGKGIRL

Sequences:

>Translated_521_residues
MNYEFREQDVLLPYQKRWIADESPLKIAEKSRRTGITWAEAADAALTASKSKAAGGTHHFYVGSNKEMAREFIDAVAMWA
KAFNYAAQDVQEEVFLDDDGNKEILTFVVYFASGFKVQALSSNPSNLRGMQGCVTIDEAAFHERLAEVLKAALALTMWGA
KVRLISTHNGVDNLFNQLIQDSRAGKKRYSIHTITLDDACRDGLYKRICQVKGKTWTQEAEDQWKRDLLRDTATEEDALE
EYYCVPKNGGGAYISRGLRERAASLADAPVISFTGSAAFNNAGEAERMRTMQEWLVENVGPQLQALPKGLRHALGEDFAR
NGDLTSFAPITVETDTKRTVPFLVELKNVPFKQQEQALYYICDRLPRRDGIKLDARGNGQYLAEQARYRYGAEVEEVILS
VAYYRENMPKFKAAFEDDEIKLPKHEDVITDLGQIKIYRGVPGIDDSRTKGSDGNKRHGDSAVAIFLAYLASKADITRYE
LHTIKANADETQRRFFGTAEENNRFDDMPHASDLRGKGIRL
>Mature_521_residues
MNYEFREQDVLLPYQKRWIADESPLKIAEKSRRTGITWAEAADAALTASKSKAAGGTHHFYVGSNKEMAREFIDAVAMWA
KAFNYAAQDVQEEVFLDDDGNKEILTFVVYFASGFKVQALSSNPSNLRGMQGCVTIDEAAFHERLAEVLKAALALTMWGA
KVRLISTHNGVDNLFNQLIQDSRAGKKRYSIHTITLDDACRDGLYKRICQVKGKTWTQEAEDQWKRDLLRDTATEEDALE
EYYCVPKNGGGAYISRGLRERAASLADAPVISFTGSAAFNNAGEAERMRTMQEWLVENVGPQLQALPKGLRHALGEDFAR
NGDLTSFAPITVETDTKRTVPFLVELKNVPFKQQEQALYYICDRLPRRDGIKLDARGNGQYLAEQARYRYGAEVEEVILS
VAYYRENMPKFKAAFEDDEIKLPKHEDVITDLGQIKIYRGVPGIDDSRTKGSDGNKRHGDSAVAIFLAYLASKADITRYE
LHTIKANADETQRRFFGTAEENNRFDDMPHASDLRGKGIRL

Specific function: Unknown

COG id: COG4373

COG function: function code R; Mu-like prophage FluMu protein gp28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp28 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004921
- InterPro:   IPR012036 [H]

Pfam domain/function: PF03237 Terminase_6 [H]

EC number: NA

Molecular weight: Translated: 58632; Mature: 58632

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYEFREQDVLLPYQKRWIADESPLKIAEKSRRTGITWAEAADAALTASKSKAAGGTHHF
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCEEE
YVGSNKEMAREFIDAVAMWAKAFNYAAQDVQEEVFLDDDGNKEILTFVVYFASGFKVQAL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCEEEEE
SSNPSNLRGMQGCVTIDEAAFHERLAEVLKAALALTMWGAKVRLISTHNGVDNLFNQLIQ
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
DSRAGKKRYSIHTITLDDACRDGLYKRICQVKGKTWTQEAEDQWKRDLLRDTATEEDALE
HHCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
EYYCVPKNGGGAYISRGLRERAASLADAPVISFTGSAAFNNAGEAERMRTMQEWLVENVG
HHEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
PQLQALPKGLRHALGEDFARNGDLTSFAPITVETDTKRTVPFLVELKNVPFKQQEQALYY
HHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEECCCCCCCCCEEEECCCCCCHHHHHHHH
ICDRLPRRDGIKLDARGNGQYLAEQARYRYGAEVEEVILSVAYYRENMPKFKAAFEDDEI
HHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCE
KLPKHEDVITDLGQIKIYRGVPGIDDSRTKGSDGNKRHGDSAVAIFLAYLASKADITRYE
ECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
LHTIKANADETQRRFFGTAEENNRFDDMPHASDLRGKGIRL
EEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNYEFREQDVLLPYQKRWIADESPLKIAEKSRRTGITWAEAADAALTASKSKAAGGTHHF
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCEEE
YVGSNKEMAREFIDAVAMWAKAFNYAAQDVQEEVFLDDDGNKEILTFVVYFASGFKVQAL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCEEEEE
SSNPSNLRGMQGCVTIDEAAFHERLAEVLKAALALTMWGAKVRLISTHNGVDNLFNQLIQ
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
DSRAGKKRYSIHTITLDDACRDGLYKRICQVKGKTWTQEAEDQWKRDLLRDTATEEDALE
HHCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
EYYCVPKNGGGAYISRGLRERAASLADAPVISFTGSAAFNNAGEAERMRTMQEWLVENVG
HHEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
PQLQALPKGLRHALGEDFARNGDLTSFAPITVETDTKRTVPFLVELKNVPFKQQEQALYY
HHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEECCCCCCCCCEEEECCCCCCHHHHHHHH
ICDRLPRRDGIKLDARGNGQYLAEQARYRYGAEVEEVILSVAYYRENMPKFKAAFEDDEI
HHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCE
KLPKHEDVITDLGQIKIYRGVPGIDDSRTKGSDGNKRHGDSAVAIFLAYLASKADITRYE
ECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
LHTIKANADETQRRFFGTAEENNRFDDMPHASDLRGKGIRL
EEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]