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The map label for this gene is yeiJ [C]

Identifier: 147674938

GI number: 147674938

Start: 1660077

End: 1661294

Strand: Reverse

Name: yeiJ [C]

Synonym: VC0395_A1541

Alternate gene names: 147674938

Gene position: 1661294-1660077 (Counterclockwise)

Preceding gene: 147674306

Following gene: 147675561

Centisome position: 54.94

GC content: 48.93

Gene sequence:

>1218_bases
TTGGGCGGCGTTATGTCATCACTCCTCGGTATGGGCGCAATTTTGCTGGTTGCGTGGCTATTTTCTACCAATAGAAAAAA
TATCAACTTGCGTACAGTTTCTTTAGCGTTACTGCTGCAAATCTTCTTCGCCTTACTGGTGCTGTATGTACCTGCGGGTA
AAGAGGCACTCAATCGTGTGACGGGCGCGGTGTCACAACTGATCAACTATGGGCAAGATGGTATCGGTTTTGTGTTTGGT
GGCCTCGCCAATGGCAGCGTAGGTTTTGTGTTTGCGATTAATGTCCTTGGCATCATCATTTTCTTCTCTGCACTGATTTC
TGGCCTTTACCATTTAGGCATCATGCCGAAAGTGATTAACCTCATCGGTGGTGGTTTACAGAAATTGCTTGGCACAGGCC
GTGCAGAATCCCTTTCTGCTACCGCAAACATTTTCGTGGGTATGATTGAAGCGCCGCTGGTGGTGAAACCTTATCTTCAT
AAAATGACCGATTCGCAATTCTTTGCAGTGATGACGGGCGGCTTAGCGTCGGTTGCTGGCGGTACTTTGGTTGGTTATGC
CTCTTTAGGTGTGGAATTGAACTATCTGATCGCGGCGGCTTTCATGTCTGCCCCTGCGGGTCTTTTGATGGCAAAAATCA
TGTTGCCAGAAACCGAACACGTCGATGCCGCGATTGCGCAAGATGAGTTGGATCTGCCGAAATCCACTAACGTCGTCGAA
GCGATTGCGGATGGCGCGATGTCGGGTGTGAAAATTGCTGTTGCGGTAGGGGCGACTTTGCTCGCTTTCGTGAGTGTGAT
TGCTCTGTTAAACGGCTTGCTCGGTTGGTTTGGTGGCTGGTTTGGCATCGAGCTAAGCTTTGAACTGATCATGGGGTATG
TTTTCGCTCCGGTAGCTTGGCTGATTGGTATTCCATGGCATGAGGCGATCACGGCAGGCTCGCTGATTGGTAACAAAGTG
GTGGTGAACGAGTTTGTCGCTTTCATTCAACTGATTGAAGTGAAAGAGCAATTGAGTGCGCATTCACAAGCGATCGTGAC
TTTCGCGCTGTGCGGTTTTGCGAATATTTCTACCATGGCGATTTTGATTGGTGGTTTGGGTAGCCTTGTACCTGAACGTC
GCTCTTTTATCTCCCAATACGGCTTCCGTGCGATTGGCGCAGGCGTATTAGCTAACCTAATGAGTGCATCGATCGCTGGA
GTGATTTTGTCTTTGTGA

Upstream 100 bases:

>100_bases
CGTATTTTGATTACCGGTTTGGTAATGAGGATTAACAAACTCACCTTGCGCATACGATTTCCTTCACTAAAATCGCCGCC
TTTCCTGTTCTACTCACAAT

Downstream 100 bases:

>100_bases
TCACAGATTGATGGATTGAGGCCAGCGAGTATGCTGGCCTTTTTTTGTTATTCCTAAATCACCGCTTTTAGTAGTGGTGA
TTGTTTTAAAGATCTCCTTT

Product: NupC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MGGVMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGAVSQLINYGQDGIGFVFG
GLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLH
KMTDSQFFAVMTGGLASVAGGTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVE
AIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIELSFELIMGYVFAPVAWLIGIPWHEAITAGSLIGNKV
VVNEFVAFIQLIEVKEQLSAHSQAIVTFALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAG
VILSL

Sequences:

>Translated_405_residues
MGGVMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGAVSQLINYGQDGIGFVFG
GLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLH
KMTDSQFFAVMTGGLASVAGGTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVE
AIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIELSFELIMGYVFAPVAWLIGIPWHEAITAGSLIGNKV
VVNEFVAFIQLIEVKEQLSAHSQAIVTFALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAG
VILSL
>Mature_404_residues
GGVMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGAVSQLINYGQDGIGFVFGG
LANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHK
MTDSQFFAVMTGGLASVAGGTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVEA
IADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIELSFELIMGYVFAPVAWLIGIPWHEAITAGSLIGNKVV
VNEFVAFIQLIEVKEQLSAHSQAIVTFALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGV
ILSL

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI42542381, Length=412, Percent_Identity=38.1067961165049, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI227116277, Length=411, Percent_Identity=36.2530413625304, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI11545853, Length=366, Percent_Identity=37.431693989071, Blast_Score=240, Evalue=1e-63,
Organism=Escherichia coli, GI1788485, Length=413, Percent_Identity=41.1622276029056, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1788488, Length=413, Percent_Identity=41.6464891041162, Blast_Score=287, Evalue=8e-79,
Organism=Escherichia coli, GI1788737, Length=404, Percent_Identity=29.9504950495049, Blast_Score=199, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17560276, Length=392, Percent_Identity=33.1632653061224, Blast_Score=218, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI71991794, Length=399, Percent_Identity=34.0852130325814, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI25146537, Length=198, Percent_Identity=36.3636363636364, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI45552517, Length=402, Percent_Identity=37.8109452736318, Blast_Score=265, Evalue=6e-71,
Organism=Drosophila melanogaster, GI19921868, Length=402, Percent_Identity=37.8109452736318, Blast_Score=265, Evalue=6e-71,
Organism=Drosophila melanogaster, GI45552519, Length=402, Percent_Identity=37.8109452736318, Blast_Score=265, Evalue=6e-71,
Organism=Drosophila melanogaster, GI281360430, Length=402, Percent_Identity=34.0796019900498, Blast_Score=222, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 42229; Mature: 42098

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGVMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TGAVSQLINYGQDGIGFVFGGLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVIN
HHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLASVAG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHHHHCC
GTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVE
CHHEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH
AIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIELSFELIMGYVFAPVAW
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGIPWHEAITAGSLIGNKVVVNEFVAFIQLIEVKEQLSAHSQAIVTFALCGFANISTMA
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL
HHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGVMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TGAVSQLINYGQDGIGFVFGGLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVIN
HHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLASVAG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHHHHCC
GTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVE
CHHEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH
AIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIELSFELIMGYVFAPVAW
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGIPWHEAITAGSLIGNKVVVNEFVAFIQLIEVKEQLSAHSQAIVTFALCGFANISTMA
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL
HHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]