| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674930
Identifier: 147674930
GI number: 147674930
Start: 2522558
End: 2523967
Strand: Reverse
Name: 147674930
Synonym: VC0395_A2366
Alternate gene names: NA
Gene position: 2523967-2522558 (Counterclockwise)
Preceding gene: 147673456
Following gene: 147675616
Centisome position: 83.46
GC content: 40.71
Gene sequence:
>1410_bases GTGATTGAACAGAATGGTTCGTTTCCAGATGATTTCGGTGTTGATTACTGCCTTATGTGGGTCAATACGGATAAATATCC TTCATATATAAGCAGGCCAGACCCTGTCAGTGGCGAGATCATCCATGAAGTAAAAGGCAATTCAAAATCATTTATTCATG CACTTCCGATTTTAATTGACCCCGATGGCATGAATGTGGTGCCAGTGAACTTATACCTCCACTCTTTATTGTCAAATCCT GATATATCCTCCGTTAAGACAATTGAATCCCATGCAGTCGCGTTATTAAGCTTCTATCGTTGGATGAACTTAGAAATCCC TGAACATATTGACCCAAGAACAGGTGTGTTGGTTGAAGAGAAGCGCTCCTTAACAATATATGACTGCACCGAGAAGATAG AAGAAAGTCCAGTCGTTAGATATCGTGATTATCTATTAGAGAATCTTTATATCAAAGATGAAAACGGAAAAATCGGAGGC TCTCCCAGTACTGCGTCGAGCTATGTGCTAAAAGTTGTCGCTTACTACACCTACCTTCACCGCCAACGGATCGTTCCAAT CAGCAAGACCTTCCGCCCATTTGAGTTTTCGGCAAAGAAAGTTCGCATACGGAACAAAAATAAGAGAGCGCAACATGACA TGCTCTCACATCTTAATGGCTATCACGGTAAAGATATTATCGTGTATACAACAGGTCTCACTAAACCATTCAAAAATATA CAGAAGCCTCAAGATGCTGATATCCGAGAGCTTCGTCCACTCCGTGAAGATGAAAAACAAGCACTTTACCGATATCTCGA TGTTAAAAATTCATCTGACACTAAAGCCCTTATGCTGTACTTAAAAACGGAGGTTGGGTTGAGATTGGAGGAACTGATAA CCTTTCCTGCTTCTGTCGTAGATAAACCAAAAGCTAAAGTGGTTAAAGTGCCAATTGGTGAGCGTATTAACGGCTGCCTA ACCAAATACAGAAAAGATAGAACGATTGAAATCCCAGACTATGTTATGGATCTTTTGTACGAGTACAAGCTAAGCAAGGT AAGGAAGGATGCAATTGAAAGCGGATTATTACGCCATAACCATCTATTCGTTCAATCGAATGGCAGTATCTACGCCCCAA ATACAATTCAAAAGTATGTGGAAGCGGTACGCAATGATTTGATTATTAGCGGATTTGATATTTATTTTGCCACTCATGAT TTACGTGCCACTTTCGCAACTGACTGGCTGTACAACAAACACATTCAAACACGCAAGCCCTTTGAAGCACTGATGTCGGA GTTGGCTGATTTAATGGGGCATGAAAGTACCGCTACTACCCAAAAATATATTAGCTACATGAATGACGATAAAACCTGGT CGGAATTCGCTCAGCGTAAAAATCAATTCGCACAACAAACGTTGAGATGA
Upstream 100 bases:
>100_bases GTTAGAGTCACAAGTTAGAGAGTTATTGGTATAAAAATTAGACAGAAGGATTCTGTGAGACTAGGCTAAAACCATAACGT GAGCTAGTTGTGGTAGCAAT
Downstream 100 bases:
>100_bases TCACATGGCAAAAAGTCGCTTATCTGTTTCCAGAAATCAACATAAACCAATCACACAACTAAAGACTAAGGATAATGTCA CTTCATTAGACTTGAGCTTT
Product: MutL protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MIEQNGSFPDDFGVDYCLMWVNTDKYPSYISRPDPVSGEIIHEVKGNSKSFIHALPILIDPDGMNVVPVNLYLHSLLSNP DISSVKTIESHAVALLSFYRWMNLEIPEHIDPRTGVLVEEKRSLTIYDCTEKIEESPVVRYRDYLLENLYIKDENGKIGG SPSTASSYVLKVVAYYTYLHRQRIVPISKTFRPFEFSAKKVRIRNKNKRAQHDMLSHLNGYHGKDIIVYTTGLTKPFKNI QKPQDADIRELRPLREDEKQALYRYLDVKNSSDTKALMLYLKTEVGLRLEELITFPASVVDKPKAKVVKVPIGERINGCL TKYRKDRTIEIPDYVMDLLYEYKLSKVRKDAIESGLLRHNHLFVQSNGSIYAPNTIQKYVEAVRNDLIISGFDIYFATHD LRATFATDWLYNKHIQTRKPFEALMSELADLMGHESTATTQKYISYMNDDKTWSEFAQRKNQFAQQTLR
Sequences:
>Translated_469_residues MIEQNGSFPDDFGVDYCLMWVNTDKYPSYISRPDPVSGEIIHEVKGNSKSFIHALPILIDPDGMNVVPVNLYLHSLLSNP DISSVKTIESHAVALLSFYRWMNLEIPEHIDPRTGVLVEEKRSLTIYDCTEKIEESPVVRYRDYLLENLYIKDENGKIGG SPSTASSYVLKVVAYYTYLHRQRIVPISKTFRPFEFSAKKVRIRNKNKRAQHDMLSHLNGYHGKDIIVYTTGLTKPFKNI QKPQDADIRELRPLREDEKQALYRYLDVKNSSDTKALMLYLKTEVGLRLEELITFPASVVDKPKAKVVKVPIGERINGCL TKYRKDRTIEIPDYVMDLLYEYKLSKVRKDAIESGLLRHNHLFVQSNGSIYAPNTIQKYVEAVRNDLIISGFDIYFATHD LRATFATDWLYNKHIQTRKPFEALMSELADLMGHESTATTQKYISYMNDDKTWSEFAQRKNQFAQQTLR >Mature_469_residues MIEQNGSFPDDFGVDYCLMWVNTDKYPSYISRPDPVSGEIIHEVKGNSKSFIHALPILIDPDGMNVVPVNLYLHSLLSNP DISSVKTIESHAVALLSFYRWMNLEIPEHIDPRTGVLVEEKRSLTIYDCTEKIEESPVVRYRDYLLENLYIKDENGKIGG SPSTASSYVLKVVAYYTYLHRQRIVPISKTFRPFEFSAKKVRIRNKNKRAQHDMLSHLNGYHGKDIIVYTTGLTKPFKNI QKPQDADIRELRPLREDEKQALYRYLDVKNSSDTKALMLYLKTEVGLRLEELITFPASVVDKPKAKVVKVPIGERINGCL TKYRKDRTIEIPDYVMDLLYEYKLSKVRKDAIESGLLRHNHLFVQSNGSIYAPNTIQKYVEAVRNDLIISGFDIYFATHD LRATFATDWLYNKHIQTRKPFEALMSELADLMGHESTATTQKYISYMNDDKTWSEFAQRKNQFAQQTLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54272; Mature: 54272
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQNGSFPDDFGVDYCLMWVNTDKYPSYISRPDPVSGEIIHEVKGNSKSFIHALPILID CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECEEEC PDGMNVVPVNLYLHSLLSNPDISSVKTIESHAVALLSFYRWMNLEIPEHIDPRTGVLVEE CCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC KRSLTIYDCTEKIEESPVVRYRDYLLENLYIKDENGKIGGSPSTASSYVLKVVAYYTYLH CCCEEEEECHHHHCCCCHHHHHHHHHHHCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH RQRIVPISKTFRPFEFSAKKVRIRNKNKRAQHDMLSHLNGYHGKDIIVYTTGLTKPFKNI HHCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHC QKPQDADIRELRPLREDEKQALYRYLDVKNSSDTKALMLYLKTEVGLRLEELITFPASVV CCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHCCCHHHHHHCCHHHH DKPKAKVVKVPIGERINGCLTKYRKDRTIEIPDYVMDLLYEYKLSKVRKDAIESGLLRHN CCCCCEEEEECCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHCC HLFVQSNGSIYAPNTIQKYVEAVRNDLIISGFDIYFATHDLRATFATDWLYNKHIQTRKP EEEEECCCCEECCHHHHHHHHHHHCCEEEECEEEEEEECCHHHHHHHHHHHHCCCCCCCH FEALMSELADLMGHESTATTQKYISYMNDDKTWSEFAQRKNQFAQQTLR HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEQNGSFPDDFGVDYCLMWVNTDKYPSYISRPDPVSGEIIHEVKGNSKSFIHALPILID CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECEEEC PDGMNVVPVNLYLHSLLSNPDISSVKTIESHAVALLSFYRWMNLEIPEHIDPRTGVLVEE CCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC KRSLTIYDCTEKIEESPVVRYRDYLLENLYIKDENGKIGGSPSTASSYVLKVVAYYTYLH CCCEEEEECHHHHCCCCHHHHHHHHHHHCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH RQRIVPISKTFRPFEFSAKKVRIRNKNKRAQHDMLSHLNGYHGKDIIVYTTGLTKPFKNI HHCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHC QKPQDADIRELRPLREDEKQALYRYLDVKNSSDTKALMLYLKTEVGLRLEELITFPASVV CCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHCCCHHHHHHCCHHHH DKPKAKVVKVPIGERINGCLTKYRKDRTIEIPDYVMDLLYEYKLSKVRKDAIESGLLRHN CCCCCEEEEECCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHCC HLFVQSNGSIYAPNTIQKYVEAVRNDLIISGFDIYFATHDLRATFATDWLYNKHIQTRKP EEEEECCCCEECCHHHHHHHHHHHCCEEEECEEEEEEECCHHHHHHHHHHHHCCCCCCCH FEALMSELADLMGHESTATTQKYISYMNDDKTWSEFAQRKNQFAQQTLR HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA