| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is wecB [H]
Identifier: 147674876
GI number: 147674876
Start: 470199
End: 471317
Strand: Direct
Name: wecB [H]
Synonym: VC0395_A0441
Alternate gene names: 147674876
Gene position: 470199-471317 (Clockwise)
Preceding gene: 147675486
Following gene: 147674871
Centisome position: 15.55
GC content: 48.44
Gene sequence:
>1119_bases GTGAAAAAAGTTCTCATCGTATTTGGTACGCGCCCAGAGGCAATCAAAATGGCACCTCTGGTGCAGCAACTCTGTCAAGA CAATCGTTTTGTCGCCAAGGTATGTGTAACGGGCCAACACCGTGAGATGTTAGATCAGGTATTAGAGCTGTTTTCGATTA CGCCTGATTTTGATCTCAACATCATGGAGCCTGGGCAAACACTCAATGGCGTGACCAGCAAAATTTTGCTCGGTATGCAG CAAGTGTTGAGTAGTGAACAGCCAGATGTGGTTTTAGTGCATGGTGATACCGCTACCACGTTTGCTGCCTCTTTAGCCGC GTATTATCAACAAATTCCGGTAGGTCATGTTGAAGCGGGTTTGAGAACGGGCAATATCTATTCCCCTTGGCCTGAAGAGG GCAACCGCAAACTCACGGCCGCACTCACGCAGTACCACTTTGCACCTACAGATACTTCGCGTGCCAATCTGCTGCAAGAA AACTACAACGCAGAGAATATTTTCGTCACTGGTAATACGGTGATTGATGCGTTGTTGGCTGTGCGTGAAAAGATCCATAC CGATATGGATCTGCAAGCCACTCTAGAGAGTCAGTTTCCAATGCTTGATGCGAGCAAAAAGCTGATTCTGGTAACAGGAC ACCGCCGTGAAAGTTTTGGTGGTGGCTTTGAGCGTATTTGCCAAGCGCTGATCACTACCGCAGAGCAGCATCCCGAATGC CAAATTTTGTATCCCGTGCATCTCAATCCGAATGTGCGTGAACCGGTCAATAAGCTCCTAAAAGGTGTCAGCAATATTGT CTTGATTGAACCGCAGCAGTATTTGCCTTTCGTTTACTTGATGGATCGCGCACACATTATTTTGACTGACTCTGGCGGCA TTCAAGAAGAGGCGCCCTCGCTGGGTAAGCCAGTGCTGGTGATGCGTGAAACGACTGAGCGCCCTGAAGCGGTGGCTGCG GGCACGGTGAAATTAGTCGGTACCAACCAACAACAAATTTGTGATGCGTTAAGCTTACTACTGACTGACCCACAGGCTTA TCAAGCCATGAGTCAGGCACACAACCCTTATGGGGATGGTAAAGCCTGTCAACGTATTGCGGACATTTTAGCGAAATAG
Upstream 100 bases:
>100_bases AATTCAGTGTTCGCTTATGTATATGTTCCTCATTTAAGGAGCAGTGGGACTTTATTGCTTGAATTTTGTGAAATTTCTTT TTTAAAGAGGATGTGGGGAA
Downstream 100 bases:
>100_bases ACTCATCAGGGGATGACAGATGTTTAATAAAGTTTCAGTGATTGGCCTAGGTTATATTGGTCTGCCAACAGCAGCCGTTT TGGCCTCTCGTGGTTTGGAT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQ QVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQE NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPEC QILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPVLVMRETTERPEAVAA GTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHNPYGDGKACQRIADILAK
Sequences:
>Translated_372_residues MKKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQ QVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQE NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPEC QILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPVLVMRETTERPEAVAA GTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHNPYGDGKACQRIADILAK >Mature_372_residues MKKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQ QVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQE NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPEC QILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPVLVMRETTERPEAVAA GTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHNPYGDGKACQRIADILAK
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=368, Percent_Identity=67.3913043478261, Blast_Score=512, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 41041; Mature: 41041
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN CCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCE IMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG EECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHCC LRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLA CEECCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHH VREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPEC HHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE QILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPS EEEEEEECCCCHHHHHHHHHHCCCCEEEECCHHHCCEEEEECCCEEEEECCCCCCCCCCC LGKPVLVMRETTERPEAVAAGTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHNPYGDG CCCCEEEEECCCCCCCCEECCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC KACQRIADILAK HHHHHHHHHHCC >Mature Secondary Structure MKKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN CCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCE IMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG EECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHCC LRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLA CEECCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHH VREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPEC HHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE QILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPS EEEEEEECCCCHHHHHHHHHHCCCCEEEECCHHHCCEEEEECCCEEEEECCCCCCCCCCC LGKPVLVMRETTERPEAVAAGTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHNPYGDG CCCCEEEEECCCCCCCCEECCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC KACQRIADILAK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]