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The map label for this gene is flgH

Identifier: 147674828

GI number: 147674828

Start: 1894929

End: 1895714

Strand: Reverse

Name: flgH

Synonym: VC0395_A1786

Alternate gene names: 147674828

Gene position: 1895714-1894929 (Counterclockwise)

Preceding gene: 147674573

Following gene: 147674065

Centisome position: 62.69

GC content: 49.11

Gene sequence:

>786_bases
ATGGCCGCGATGAAACGTCTACTTGCTTCTAGCTTATTGATTCTGCTCTCAGGTTGTAGCTTGATGCAGCCACCGATTGA
ATCTGCTGAAACCATTCAAGGTACCACGACGGTGGATGCGGTTGAGGGGGACAAATCTGAGAGTAACTCGGGTTTGACCG
ATGCGCTGCGCAATCGTACCGACCCCGTTGCGGGCGATCCCGCATGGGCACCTATTCATCCGAAAGGTAAGCCTGAGCAT
TACGCGGCGGAAACGGGCTCGCTGTTTAATTTGGCGAGCAGCAGTAGCATGTATGACGATTCTAAACCGCGTGGTGTGGG
TGACATCATTACCGTGACTCTCAATGAAAGCACCAAAGCAGCCAAAAGTGCGGATGCGGATCTGAACAAGAAAAATGATG
CTTCGATGGATCCGCTGGCGGTCGGCGGCAAAGATTTGACCATCGGGGATTACAATTTCTCTTACGCACTGAAAAACGAC
AATAAGTTTTCAGGGAGCGCGGCGGCTAACCAAAGTAACAGCATGTCAGGCTCGATTACGGTAGAAGTGATTGAAGTGTT
AGCGAACGGTAACTTAGTGATCCGCGGTGAAAAATGGCTCACTCTGAACACGGGTGATGAGTACATTCGTCTCAGTGGCA
CCATCCGTCCGGATGATATCGACTTCGACAATACGATTGCTTCTAACCGTATTTCCAATGCGCGAATTCAATATTCTGGC
ACTGGAACCAACCAAGATATGCAAGAACCCGGATTCTTGGCACGATTTTTTAATGTCTCTTTATAA

Upstream 100 bases:

>100_bases
TTGAAGCGCAGCGTGTGTACGAGATGAACTCTAAAGTTATCTCCGCCGTCGATAAGATGATGAGCTTCGTTAACCAACAA
CTGTAATTGCTAACTAAGAG

Downstream 100 bases:

>100_bases
GTCGAGCCGCTGGGCTAGTTTATTGACAGCATAGTGAACGGTGAGGCCCTTTGGCCTCATTGTTGTTTTAGAGAGTAAGG
TACATCCGCCATGAGAAAAT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAAMKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRTDPVAGDPAWAPIHPKGKPEH
YAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAAKSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKND
NKFSGSAAANQSNSMSGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSG
TGTNQDMQEPGFLARFFNVSL

Sequences:

>Translated_261_residues
MAAMKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRTDPVAGDPAWAPIHPKGKPEH
YAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAAKSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKND
NKFSGSAAANQSNSMSGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSG
TGTNQDMQEPGFLARFFNVSL
>Mature_260_residues
AAMKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRTDPVAGDPAWAPIHPKGKPEHY
AAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAAKSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKNDN
KFSGSAAANQSNSMSGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGT
GTNQDMQEPGFLARFFNVSL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=258, Percent_Identity=30.6201550387597, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_VIBC3 (A5F678)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- STRING:   A5F678
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A1786
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   DPIYAGG
- ProtClustDB:   PRK00249
- BioCyc:   VCHO345073:VC0395_A1786-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 27790; Mature: 27659

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAMKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCC
DPVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKA
CCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHH
AKSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSIT
HHHCCCCCCCCCCCCCCCEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH
VEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSG
HEEHHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEC
TGTNQDMQEPGFLARFFNVSL
CCCCCCCCCCCCEEHEEECCC
>Mature Secondary Structure 
AAMKRLLASSLLILLSGCSLMQPPIESAETIQGTTTVDAVEGDKSESNSGLTDALRNRT
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCC
DPVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKA
CCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHH
AKSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSIT
HHHCCCCCCCCCCCCCCCEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH
VEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSG
HEEHHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEC
TGTNQDMQEPGFLARFFNVSL
CCCCCCCCCCCCEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA