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The map label for this gene is rfbV

Identifier: 147674792

GI number: 147674792

Start: 2789388

End: 2790500

Strand: Reverse

Name: rfbV

Synonym: VC0395_A2637

Alternate gene names: NA

Gene position: 2790500-2789388 (Counterclockwise)

Preceding gene: 147674200

Following gene: 147674538

Centisome position: 92.28

GC content: 35.13

Gene sequence:

>1113_bases
ATGAAAGTATTGCATGTATATAGAACCTGTTATCCTGAAACAAAAGGCGGTGTTGAGCAAGTTATTCGATTTATAGCATC
GGGAACAAAACCGTTAGGAATAGAAACTAAAATACTTACATTATCTGATAATCAAACTTCTTCTTATTATTGTGAAGGAA
CAGAAATAATCTCAGTAAAAAAATCGATTGAAATCTCTTCAAATGGATTCTCGTGGAAGCTAATTAGACAATTCAAGAAA
CTTTCAAAATGGGCTGACATAATCCATTACCATTATCCATGGCCAACCGGAGACTTTCTCTCTTTATTTGGCTCATCGAA
TCCAAGTATTGTAACGTATCATTCCGATATTATTCGTCAAAAGTGCTTAAAGAAATTATATCAACCACTTGAGAGTCATT
TTTTAAATCAAGCAAATATCCTTGTGGCAACATCACCACAATATGCACACACAAGCGAGAATTTGTTAAGGCATAAAAAT
AAGGTAAAAATAATTCCACTTGCCGTTGATGAGAATACTTATCCTATCCCATCAAACGATAATATTAATAAATGGCGAGA
AAAAGTAGGGGAAGGTTTTTTCTTATTTGTTGGCGTATTACGGTACTACAAGGGTCTAGATTTCTTACTTGAAGCAGCAA
AAATCAACCAGCTACCTGTTATAATTGCTGGTGACGGTCCGGAAAGAGTAAAACTAGAGTCTTATATTGCCAAACACAAT
CTTGAAAACGTTAAGCTAGTAGGATTCATTTCTGAGGAAGACAAAGTCATATTACATTTACTTTCTAAAGCTTTTGTTTT
CCCATCTCACCTACGCTCAGAAGCTTTTGGTATATCACTTATCGAAGCACAAATGTACTGTAAAGCCATTATTAGTAGTG
ATATTGGCACAGGTTCATCTTATGTGAACATCAATGGCGAAACAGGGTTAGTTGTTCCGCCAGCTGACAGTCAAAGCTTT
TCCGATGCAATGTTAAAAATAGAACATGATACAAAACTTTGTGAAAAATTAGGTATTAATGCTCGCAAACGTTTTGAACA
GGAATTCACAGCACATCGCTATGCACAAAGCTATACTAAACTGTATAGTGAACTCTTCGGAAATGTCTGTTGA

Upstream 100 bases:

>100_bases
ACGGAACTTGATGTATGCTGTCATAACTTTGATGTTGAATGTATTAAGCGAATTTTACTTGATGCACCTACGGGTTATTC
GCCACAAAAATGAGAATAAA

Downstream 100 bases:

>100_bases
ACTTGCAATGACATACGGAATATATTAAATTATTTTATGATACATATTTAAAACAGATATTCCCATTAATATCCTGCGTT
GCTTTATTAAACTCAGGATG

Product: lipopolysaccharide biosynthesis protein RfbV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYCEGTEIISVKKSIEISSNGFSWKLIRQFKK
LSKWADIIHYHYPWPTGDFLSLFGSSNPSIVTYHSDIIRQKCLKKLYQPLESHFLNQANILVATSPQYAHTSENLLRHKN
KVKIIPLAVDENTYPIPSNDNINKWREKVGEGFFLFVGVLRYYKGLDFLLEAAKINQLPVIIAGDGPERVKLESYIAKHN
LENVKLVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIISSDIGTGSSYVNINGETGLVVPPADSQSF
SDAMLKIEHDTKLCEKLGINARKRFEQEFTAHRYAQSYTKLYSELFGNVC

Sequences:

>Translated_370_residues
MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYCEGTEIISVKKSIEISSNGFSWKLIRQFKK
LSKWADIIHYHYPWPTGDFLSLFGSSNPSIVTYHSDIIRQKCLKKLYQPLESHFLNQANILVATSPQYAHTSENLLRHKN
KVKIIPLAVDENTYPIPSNDNINKWREKVGEGFFLFVGVLRYYKGLDFLLEAAKINQLPVIIAGDGPERVKLESYIAKHN
LENVKLVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIISSDIGTGSSYVNINGETGLVVPPADSQSF
SDAMLKIEHDTKLCEKLGINARKRFEQEFTAHRYAQSYTKLYSELFGNVC
>Mature_370_residues
MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYCEGTEIISVKKSIEISSNGFSWKLIRQFKK
LSKWADIIHYHYPWPTGDFLSLFGSSNPSIVTYHSDIIRQKCLKKLYQPLESHFLNQANILVATSPQYAHTSENLLRHKN
KVKIIPLAVDENTYPIPSNDNINKWREKVGEGFFLFVGVLRYYKGLDFLLEAAKINQLPVIIAGDGPERVKLESYIAKHN
LENVKLVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIISSDIGTGSSYVNINGETGLVVPPADSQSF
SDAMLKIEHDTKLCEKLGINARKRFEQEFTAHRYAQSYTKLYSELFGNVC

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41902; Mature: 41902

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYCEGTEIISVK
CCEEEEEHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEECCCEEEEEE
KSIEISSNGFSWKLIRQFKKLSKWADIIHYHYPWPTGDFLSLFGSSNPSIVTYHSDIIRQ
EEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCEEEEHHHHHHH
KCLKKLYQPLESHFLNQANILVATSPQYAHTSENLLRHKNKVKIIPLAVDENTYPIPSND
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCC
NINKWREKVGEGFFLFVGVLRYYKGLDFLLEAAKINQLPVIIAGDGPERVKLESYIAKHN
CHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
LENVKLVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIISSDIGTGSS
CCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC
YVNINGETGLVVPPADSQSFSDAMLKIEHDTKLCEKLGINARKRFEQEFTAHRYAQSYTK
EEEECCCCCEEECCCCCCCCCHHHEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LYSELFGNVC
HHHHHHCCCC
>Mature Secondary Structure
MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYCEGTEIISVK
CCEEEEEHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEECCCEEEEEE
KSIEISSNGFSWKLIRQFKKLSKWADIIHYHYPWPTGDFLSLFGSSNPSIVTYHSDIIRQ
EEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCEEEEHHHHHHH
KCLKKLYQPLESHFLNQANILVATSPQYAHTSENLLRHKNKVKIIPLAVDENTYPIPSND
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCC
NINKWREKVGEGFFLFVGVLRYYKGLDFLLEAAKINQLPVIIAGDGPERVKLESYIAKHN
CHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
LENVKLVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIISSDIGTGSS
CCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC
YVNINGETGLVVPPADSQSFSDAMLKIEHDTKLCEKLGINARKRFEQEFTAHRYAQSYTK
EEEECCCCCEEECCCCCCCCCHHHEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LYSELFGNVC
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]