| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674618
Identifier: 147674618
GI number: 147674618
Start: 753693
End: 754958
Strand: Direct
Name: 147674618
Synonym: VC0395_A0727
Alternate gene names: NA
Gene position: 753693-754958 (Clockwise)
Preceding gene: 147674335
Following gene: 147674623
Centisome position: 24.92
GC content: 47.24
Gene sequence:
>1266_bases ATGAAATCAATAAAAATGATCGGTGCAGTGGGTGGGGCTGTTGCGCTAGGTTTGTGTTGGCCACTCGCGGTGGGCCAAAT CGGTGAATCTGCGATCAAAGATGGCCTCAACAATTTTGAAAGCTCATCAACCAAGGCTGAACTGGTTAACTATCAGCGCG GTTATCTGTCATCACAAATGCAGACGCGTTACAAAATCACAGACCCGACGATTGTGGCGCAGTTAGAAGCAGAAGGTATT CCGACCGAAATTTTAGTCGACAGTACACTGACTCATGGCCTGATGGGGGTGTCAGCGGTATCAACATTGCCGCAATTCCC TGAGTTTCCACTGCAGATTCTTTCGAATACCAAGTTAAACGGTAACACCGATTACACGGTGAAGCTGGAACAGTGGAACT ACGTATTCCAAGGTGAAGAGCCTGTTGCAGTGACCATTGAACCGGCGCAAATGAGCGGTTCTTTAACGACATTGGGTGAA ATGACGTTCCAACTGAACGTACCAAAGATCATTTTGGATTTTGAAAACCAAGCGCAGATGGTACTCAGCCAGATCACCGG TGACGGTCAAGGTAAAGAGAGTGATGGTTTGTGGCTAGGCGCACAGAATTTCAAGCTGGATAAACTGAGTGTCAACCAAG AGGGACAAACGGAGTTTGATATGGGTGGTTTTACTTACCATTTCACTTCAGGGTTGGATACCACACAGACTCGTTTTACC ACGGCTCACAAAATGAAGATTGCCGATGCCAAATACAGCGGCGGCGAGTTTAAAGAGTTCGCTTTAGATTTCACGTTGGG GGACTTGGATACCACGGCCACCAAAGCGCTGTCTAAACTTTATCAAGGTGCGCCAGAGATGACCGAGCAGGATGTTGAGC AGATCTTGCCACAAGTGGAAGCACTGTTCAGTAAAGGGTTCTTCGTTTCAGTGGATAACTTCTCGGCCAATATTTCTGGT GGTGATTTTGCATCGAATTGGCGACTGAATGTGCCTGAAGGGACGGAAAATCTACTGCAAGATCCGATGGCGGTGATCCC AGCGCTGACCGGGCAGACTAAAACGTATATTTCCAACCAGTTGGTGACGGCTTTCCCATTTATTGCACAAGGGATTGACC AGCTCATGATGATGGAAATGATGACTCAAGATGATAAAGGCTACACCCTACAAGCGGAAATCAAAGAGGGTAATGTGGTA TTCCCGAACGGAAAAACCATGCCACTCGTCATGTTGTTAATGCCGCTGATGATGTCACAAGGCTAA
Upstream 100 bases:
>100_bases ACTTTTCCCGTTGTTTGCACAAATGTTGACAATTATTTGTATCTTGTACGAGTTTCGTCACCTAAACTAAGGAAACTCAA TCCCAAGGAAATATTCGACT
Downstream 100 bases:
>100_bases AAACTCGCGCGGTCGTTCGTTGCTTGGGGAAAGAGGCGTTAAGGCCTCTTTTCTCGCTTTTTATCTGGCGTAAAAAGTGG TATTAATCACAACACTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKSIKMIGAVGGAVALGLCWPLAVGQIGESAIKDGLNNFESSSTKAELVNYQRGYLSSQMQTRYKITDPTIVAQLEAEGI PTEILVDSTLTHGLMGVSAVSTLPQFPEFPLQILSNTKLNGNTDYTVKLEQWNYVFQGEEPVAVTIEPAQMSGSLTTLGE MTFQLNVPKIILDFENQAQMVLSQITGDGQGKESDGLWLGAQNFKLDKLSVNQEGQTEFDMGGFTYHFTSGLDTTQTRFT TAHKMKIADAKYSGGEFKEFALDFTLGDLDTTATKALSKLYQGAPEMTEQDVEQILPQVEALFSKGFFVSVDNFSANISG GDFASNWRLNVPEGTENLLQDPMAVIPALTGQTKTYISNQLVTAFPFIAQGIDQLMMMEMMTQDDKGYTLQAEIKEGNVV FPNGKTMPLVMLLMPLMMSQG
Sequences:
>Translated_421_residues MKSIKMIGAVGGAVALGLCWPLAVGQIGESAIKDGLNNFESSSTKAELVNYQRGYLSSQMQTRYKITDPTIVAQLEAEGI PTEILVDSTLTHGLMGVSAVSTLPQFPEFPLQILSNTKLNGNTDYTVKLEQWNYVFQGEEPVAVTIEPAQMSGSLTTLGE MTFQLNVPKIILDFENQAQMVLSQITGDGQGKESDGLWLGAQNFKLDKLSVNQEGQTEFDMGGFTYHFTSGLDTTQTRFT TAHKMKIADAKYSGGEFKEFALDFTLGDLDTTATKALSKLYQGAPEMTEQDVEQILPQVEALFSKGFFVSVDNFSANISG GDFASNWRLNVPEGTENLLQDPMAVIPALTGQTKTYISNQLVTAFPFIAQGIDQLMMMEMMTQDDKGYTLQAEIKEGNVV FPNGKTMPLVMLLMPLMMSQG >Mature_421_residues MKSIKMIGAVGGAVALGLCWPLAVGQIGESAIKDGLNNFESSSTKAELVNYQRGYLSSQMQTRYKITDPTIVAQLEAEGI PTEILVDSTLTHGLMGVSAVSTLPQFPEFPLQILSNTKLNGNTDYTVKLEQWNYVFQGEEPVAVTIEPAQMSGSLTTLGE MTFQLNVPKIILDFENQAQMVLSQITGDGQGKESDGLWLGAQNFKLDKLSVNQEGQTEFDMGGFTYHFTSGLDTTQTRFT TAHKMKIADAKYSGGEFKEFALDFTLGDLDTTATKALSKLYQGAPEMTEQDVEQILPQVEALFSKGFFVSVDNFSANISG GDFASNWRLNVPEGTENLLQDPMAVIPALTGQTKTYISNQLVTAFPFIAQGIDQLMMMEMMTQDDKGYTLQAEIKEGNVV FPNGKTMPLVMLLMPLMMSQG
Specific function: Unknown
COG id: COG5339
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46022; Mature: 46022
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIKMIGAVGGAVALGLCWPLAVGQIGESAIKDGLNNFESSSTKAELVNYQRGYLSSQM CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QTRYKITDPTIVAQLEAEGIPTEILVDSTLTHGLMGVSAVSTLPQFPEFPLQILSNTKLN HCEEEECCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC GNTDYTVKLEQWNYVFQGEEPVAVTIEPAQMSGSLTTLGEMTFQLNVPKIILDFENQAQM CCCCEEEEEECCCEEEECCCCEEEEEEHHHCCCCEEEEEEEEEEECCCEEEEECCCHHHH VLSQITGDGQGKESDGLWLGAQNFKLDKLSVNQEGQTEFDMGGFTYHFTSGLDTTQTRFT HHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEECCCCEEEEEECCCCCCHHHEE TAHKMKIADAKYSGGEFKEFALDFTLGDLDTTATKALSKLYQGAPEMTEQDVEQILPQVE HHHEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALFSKGFFVSVDNFSANISGGDFASNWRLNVPEGTENLLQDPMAVIPALTGQTKTYISNQ HHHCCCCEEEECCCEEECCCCCCCCCCEEECCCCHHHHHHCHHHHHHCCCCCHHHHHHCH LVTAFPFIAQGIDQLMMMEMMTQDDKGYTLQAEIKEGNVVFPNGKTMPLVMLLMPLMMSQ HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHHCC G C >Mature Secondary Structure MKSIKMIGAVGGAVALGLCWPLAVGQIGESAIKDGLNNFESSSTKAELVNYQRGYLSSQM CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QTRYKITDPTIVAQLEAEGIPTEILVDSTLTHGLMGVSAVSTLPQFPEFPLQILSNTKLN HCEEEECCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC GNTDYTVKLEQWNYVFQGEEPVAVTIEPAQMSGSLTTLGEMTFQLNVPKIILDFENQAQM CCCCEEEEEECCCEEEECCCCEEEEEEHHHCCCCEEEEEEEEEEECCCEEEEECCCHHHH VLSQITGDGQGKESDGLWLGAQNFKLDKLSVNQEGQTEFDMGGFTYHFTSGLDTTQTRFT HHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEECCCCEEEEEECCCCCCHHHEE TAHKMKIADAKYSGGEFKEFALDFTLGDLDTTATKALSKLYQGAPEMTEQDVEQILPQVE HHHEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALFSKGFFVSVDNFSANISGGDFASNWRLNVPEGTENLLQDPMAVIPALTGQTKTYISNQ HHHCCCCEEEECCCEEECCCCCCCCCCEEECCCCHHHHHHCHHHHHHCCCCCHHHHHHCH LVTAFPFIAQGIDQLMMMEMMTQDDKGYTLQAEIKEGNVVFPNGKTMPLVMLLMPLMMSQ HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA