| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147674608
Identifier: 147674608
GI number: 147674608
Start: 236591
End: 236962
Strand: Reverse
Name: 147674608
Synonym: VC0395_A0228
Alternate gene names: NA
Gene position: 236962-236591 (Counterclockwise)
Preceding gene: 147675380
Following gene: 147675427
Centisome position: 7.84
GC content: 46.77
Gene sequence:
>372_bases ATGATCGAAAAACGTCGCTTTTCACGCATCCTGTATCAAGCGCCAGCCACCCTAAGCCAAGGCGATAAACAACTGTCGAC TTGCATTCAGGATCTATCGCTACACGGCTTGCTGCTCTGGTCAGAAGATGAGCCGGATTTAGATACTCACGCTTTAGTGG ATGTGGTTTTTAGCCTACCAGAAAGCGATGTAACCATATCCCTCAGCGCAAAAGTCATCAGTATCCAAGAGCGGATCATT CGAATGGCGATCAGCCATATTGATATTGAAAGCATTGCGCACTTACGTCGCTTAGTGGAGTTGAATGTGGGCGATGACAG CTTACTGCACCGAGACTTAGAGCATCTTTCTGATTTAGGACTGCATGAGTAA
Upstream 100 bases:
>100_bases TTGTGATTGAGTAAGCTTATTTCAGCATACATCCGGTGATTTAATGTACCCTTTGCTATGCTTGTCCTATCTATACGTCG TCTTTGTCAGAGAGAACGCC
Downstream 100 bases:
>100_bases TCCCAAGCCCAAATGGACTTGGGATGTTATTGACAGTGAGAGTGACGGTGAGAGGCGAATGATGCGTTAACCTCTGTGGA TCGCATCATTCGCTTGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Carbamoylphosphate Synthase Large Subunit; Signaling Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MIEKRRFSRILYQAPATLSQGDKQLSTCIQDLSLHGLLLWSEDEPDLDTHALVDVVFSLPESDVTISLSAKVISIQERII RMAISHIDIESIAHLRRLVELNVGDDSLLHRDLEHLSDLGLHE
Sequences:
>Translated_123_residues MIEKRRFSRILYQAPATLSQGDKQLSTCIQDLSLHGLLLWSEDEPDLDTHALVDVVFSLPESDVTISLSAKVISIQERII RMAISHIDIESIAHLRRLVELNVGDDSLLHRDLEHLSDLGLHE >Mature_123_residues MIEKRRFSRILYQAPATLSQGDKQLSTCIQDLSLHGLLLWSEDEPDLDTHALVDVVFSLPESDVTISLSAKVISIQERII RMAISHIDIESIAHLRRLVELNVGDDSLLHRDLEHLSDLGLHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13917; Mature: 13917
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKRRFSRILYQAPATLSQGDKQLSTCIQDLSLHGLLLWSEDEPDLDTHALVDVVFSLP CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCC ESDVTISLSAKVISIQERIIRMAISHIDIESIAHLRRLVELNVGDDSLLHRDLEHLSDLG CCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC LHE CCC >Mature Secondary Structure MIEKRRFSRILYQAPATLSQGDKQLSTCIQDLSLHGLLLWSEDEPDLDTHALVDVVFSLP CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCC ESDVTISLSAKVISIQERIIRMAISHIDIESIAHLRRLVELNVGDDSLLHRDLEHLSDLG CCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC LHE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA