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The map label for this gene is yeaY [H]

Identifier: 147674501

GI number: 147674501

Start: 1692870

End: 1693478

Strand: Reverse

Name: yeaY [H]

Synonym: VC0395_A1572

Alternate gene names: 147674501

Gene position: 1693478-1692870 (Counterclockwise)

Preceding gene: 147675166

Following gene: 147674280

Centisome position: 56.0

GC content: 50.57

Gene sequence:

>609_bases
TTGCGCAGTTGCTTGGGGTCGATATCTACATCTAAAACTGAGGTGAATTCGATGAAGATGACTGTGCTGAAATTACTCAT
ACCTACCATGGCTCTGCTGCTGTCTGCTTGTGCGAGCTTGCCACCTGAGTTGGGCAATCCCGATGATAAAAGCGTTGTGA
CTCAATATTCGGCTTGGCTTGAGCGCGATCCAGCTACGCAATCACCCGTTCGAATGGGCGGCGTTGTTGCCAACATCAGC
AACCAAAAAGATCGCACCCGCGTTGAGCTGGTCAACTTACCGATTGATAGCGCAGGGCGTCCCAACATCCATCAAGAGCC
GCAAGGTCGCTTTGTCGCTTACGTGCCGGGATTCCTAGATCCAATCACTTATGGGGAAGGTCGCTTGCTCACGCTTTATG
GTACGACAGCGCCATCTGAACAAGGCAAAGTGGGTGACTATGAACATACTTATCCGGTGATGAATGCGCAAGGTTACCAT
TTGTGGCGAGTGGAAGAGCGAGTCGAAGTCGATGATATTGGGCCTTACATGTTCCCTTGTCGCGGTTTCTACTGTTGGCC
AAGGACGATGCCTGAGCGGGACGGTAAGATCATTCAAGAAGTTAAATGA

Upstream 100 bases:

>100_bases
ATCCATCGCGCGCAAGTGCAGTACGATTTGCCTGAAGGGCGGGGTCGTAAAGCGATGGAAGAGTACCTGAATGTGATGAA
TCAAGCGCGCAAAGAGGAAC

Downstream 100 bases:

>100_bases
ACTCTATTTCAACCACTTATCTGCTCGAACAAGGCCAATTAGCGGCCATTGAAGTGGGCAATGCAAAAATGGCCGAAGTC
TCGGTCATTTTTATTCACGG

Product: putative outer membrane lipoprotein Slp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRSCLGSISTSKTEVNSMKMTVLKLLIPTMALLLSACASLPPELGNPDDKSVVTQYSAWLERDPATQSPVRMGGVVANIS
NQKDRTRVELVNLPIDSAGRPNIHQEPQGRFVAYVPGFLDPITYGEGRLLTLYGTTAPSEQGKVGDYEHTYPVMNAQGYH
LWRVEERVEVDDIGPYMFPCRGFYCWPRTMPERDGKIIQEVK

Sequences:

>Translated_202_residues
MRSCLGSISTSKTEVNSMKMTVLKLLIPTMALLLSACASLPPELGNPDDKSVVTQYSAWLERDPATQSPVRMGGVVANIS
NQKDRTRVELVNLPIDSAGRPNIHQEPQGRFVAYVPGFLDPITYGEGRLLTLYGTTAPSEQGKVGDYEHTYPVMNAQGYH
LWRVEERVEVDDIGPYMFPCRGFYCWPRTMPERDGKIIQEVK
>Mature_202_residues
MRSCLGSISTSKTEVNSMKMTVLKLLIPTMALLLSACASLPPELGNPDDKSVVTQYSAWLERDPATQSPVRMGGVVANIS
NQKDRTRVELVNLPIDSAGRPNIHQEPQGRFVAYVPGFLDPITYGEGRLLTLYGTTAPSEQGKVGDYEHTYPVMNAQGYH
LWRVEERVEVDDIGPYMFPCRGFYCWPRTMPERDGKIIQEVK

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=156, Percent_Identity=30.1282051282051, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI87082278, Length=146, Percent_Identity=30.8219178082192, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 22565; Mature: 22565

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSCLGSISTSKTEVNSMKMTVLKLLIPTMALLLSACASLPPELGNPDDKSVVTQYSAWL
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ERDPATQSPVRMGGVVANISNQKDRTRVELVNLPIDSAGRPNIHQEPQGRFVAYVPGFLD
HCCCCCCCCHHHCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCC
PITYGEGRLLTLYGTTAPSEQGKVGDYEHTYPVMNAQGYHLWRVEERVEVDDIGPYMFPC
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEECC
RGFYCWPRTMPERDGKIIQEVK
CCEEECCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MRSCLGSISTSKTEVNSMKMTVLKLLIPTMALLLSACASLPPELGNPDDKSVVTQYSAWL
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ERDPATQSPVRMGGVVANISNQKDRTRVELVNLPIDSAGRPNIHQEPQGRFVAYVPGFLD
HCCCCCCCCHHHCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCC
PITYGEGRLLTLYGTTAPSEQGKVGDYEHTYPVMNAQGYHLWRVEERVEVDDIGPYMFPC
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEECC
RGFYCWPRTMPERDGKIIQEVK
CCEEECCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]