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The map label for this gene is yehT [C]

Identifier: 147674462

GI number: 147674462

Start: 231670

End: 232383

Strand: Reverse

Name: yehT [C]

Synonym: VC0395_A0224

Alternate gene names: 147674462

Gene position: 232383-231670 (Counterclockwise)

Preceding gene: 147675427

Following gene: 147673249

Centisome position: 7.68

GC content: 47.9

Gene sequence:

>714_bases
ATGTTATCTGCACTACTCATTGACGATGAACGCTTTGCCCGTGAAGAGCTCGCGGAACTCTTAGCGGAAAGTGGCCAGAT
TGAGGTCATCGGCCAAGCCAGCAATGCAATTGAAGGGTTGAAAAAAATCAATCAGCTCAAGCCGGATGTGGTGTTTTTGG
ATATTCAGATGCCGCAAATTTCGGGCATTGAGCTGCTAAGTATGCTTGACCCAGAGACCATGCCTGAGGTGGTGTTTGTT
ACCGCCTACGATCAATATGCGCTGCAAGCGTTTGAAGATAACGCGTTTGACTATCTGCTCAAGCCGGTCGACACCGAACG
TTTAGCTAAAACCGTGCAGCGTTTGCTGCGCCAACATAAGAAAAGTGACTACTCACCACTGACGCAACCAAGCTTAGATC
AGATCCCTTGCACGGGTTTAAACCGAATTGTGCTACTGCCGATTAATGAAGTGGAATTTGCCTACAGTGACATCAGTGGC
GTCAATGTGCAGACTGCGCAGCAAAAAGCGACCAGTCAATTGACCTTGAAGGTGTTGGAAGAGAAAACCGCGTTAGTGCG
CTGCCATCGCCAGTACTTGGTGAATTTGAAAGCGATTCGCGAAATAAAACTGTTAGAAAACGGGCTGGCGGAGATGATCA
CTCATGCAGGACATAAGGTTCCGGTCAGCCGCCGTTATCTTAAAGAACTGAAAGAGATGCTGGGATTTTACTGA

Upstream 100 bases:

>100_bases
ATTTGGTACAAAATCAGGGCTACAGATTGAGGTCGCGCCACAAGAGTACACGCGAATGAGCTTTGTCATTCCACAGCAAG
GCACTTACTAAGGGATTAAC

Downstream 100 bases:

>100_bases
TCCTAGCTCTACTTCTATGAGGAAAACTATACGGAGAACTGCTCGATTAAGCGCTGCATATTGGCTGACGCTTGCTGCCA
ACGATCTAAACGCTTCAGCT

Product: putative two-component response-regulatory protein YehT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQISGIELLSMLDPETMPEVVFV
TAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHKKSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISG
VNVQTAQQKATSQLTLKVLEEKTALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYLKELKEMLGFY

Sequences:

>Translated_237_residues
MLSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQISGIELLSMLDPETMPEVVFV
TAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHKKSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISG
VNVQTAQQKATSQLTLKVLEEKTALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYLKELKEMLGFY
>Mature_237_residues
MLSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQISGIELLSMLDPETMPEVVFV
TAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHKKSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISG
VNVQTAQQKATSQLTLKVLEEKTALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYLKELKEMLGFY

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

Organism=Escherichia coli, GI87082052, Length=239, Percent_Identity=53.1380753138075, Blast_Score=258, Evalue=3e-70,
Organism=Escherichia coli, GI1788724, Length=242, Percent_Identity=29.3388429752066, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=37.9310344827586, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y693_VIBCH (Q9KU36)

Other databases:

- EMBL:   AE003852
- PIR:   B82292
- RefSeq:   NP_230342.1
- ProteinModelPortal:   Q9KU36
- GeneID:   2615482
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC0693
- TIGR:   VC_0693
- HOGENOM:   HBG753323
- OMA:   LIRCHRQ
- ProtClustDB:   PRK11697
- GO:   GO:0006350
- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789
- SMART:   SM00850
- SMART:   SM00448

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 26857; Mature: 26857

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50930 HTH_LYTTR; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQI
CCCEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCC
SGIELLSMLDPETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK
CCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH
KSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQLTLKVLE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
EKTALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYLKELKEMLGFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQI
CCCEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCC
SGIELLSMLDPETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQHK
CCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH
KSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQLTLKVLE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
EKTALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGHKVPVSRRYLKELKEMLGFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301