| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674431
Identifier: 147674431
GI number: 147674431
Start: 1904244
End: 1904681
Strand: Reverse
Name: 147674431
Synonym: VC0395_A1798
Alternate gene names: NA
Gene position: 1904681-1904244 (Counterclockwise)
Preceding gene: 147674348
Following gene: 147674785
Centisome position: 62.98
GC content: 50.23
Gene sequence:
>438_bases ATGATGAAATCTAGCTTACTACTCCTAGTGGCAGCCTTAATGATGACGGGATGCCAACCCTTGCAAAGCATGCGCCCTGA TGATTGGTTAACGGCGGTTGGCTATGCCAATATCAGCGAGCAGAGAGGGCGTGATGAGGCCGAGAAGCAAGTGCGTGCGA TGCGTGCTTCTAAAATTGATGCTTACCGCGAGCTTGCTGAGCAGGTGTATGGTATGCGCATCAGTGGTCGTGCTGAGTTA CAAGATCAACGTCTTGGTACAGAGTGGACGGCAGGTGCGGTCGATGGTGTGATTCGCGGTGCTGAAGTGGTACGCAGTTA TAAGGTTGGGGACAGCTATGTCACTGAACTGAGACTTGATATTCGCAAGATGGACAAGATGCGTGATTACGGGGAAGTTC AACAAGTTCCCGAAAAACGACAAATGACCCTATTCTAG
Upstream 100 bases:
>100_bases GATACGCTCAACAGTATCCGTACCCAAGATGGAGTGTTGATCCGCTCAGATCCAACCATCACTCAGCCGTACACCGTGAT TTTACGTCCATAGGAGAACG
Downstream 100 bases:
>100_bases CGCTCACCTCTTCATCTCCCAGAACGTCAAAAGCGGCAATGATTGCCGCTTTTTTGCTTGTTAAGTCTTACTGATTTGTT TGAGTGCTTCGCTTTAAGAG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MMKSSLLLLVAALMMTGCQPLQSMRPDDWLTAVGYANISEQRGRDEAEKQVRAMRASKIDAYRELAEQVYGMRISGRAEL QDQRLGTEWTAGAVDGVIRGAEVVRSYKVGDSYVTELRLDIRKMDKMRDYGEVQQVPEKRQMTLF
Sequences:
>Translated_145_residues MMKSSLLLLVAALMMTGCQPLQSMRPDDWLTAVGYANISEQRGRDEAEKQVRAMRASKIDAYRELAEQVYGMRISGRAEL QDQRLGTEWTAGAVDGVIRGAEVVRSYKVGDSYVTELRLDIRKMDKMRDYGEVQQVPEKRQMTLF >Mature_145_residues MMKSSLLLLVAALMMTGCQPLQSMRPDDWLTAVGYANISEQRGRDEAEKQVRAMRASKIDAYRELAEQVYGMRISGRAEL QDQRLGTEWTAGAVDGVIRGAEVVRSYKVGDSYVTELRLDIRKMDKMRDYGEVQQVPEKRQMTLF
Specific function: Unknown
COG id: COG3018
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16511; Mature: 16511
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKSSLLLLVAALMMTGCQPLQSMRPDDWLTAVGYANISEQRGRDEAEKQVRAMRASKID CCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHH AYRELAEQVYGMRISGRAELQDQRLGTEWTAGAVDGVIRGAEVVRSYKVGDSYVTELRLD HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IRKMDKMRDYGEVQQVPEKRQMTLF HHHHHHHHHHHHHHHCCHHCCCCCC >Mature Secondary Structure MMKSSLLLLVAALMMTGCQPLQSMRPDDWLTAVGYANISEQRGRDEAEKQVRAMRASKID CCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHH AYRELAEQVYGMRISGRAELQDQRLGTEWTAGAVDGVIRGAEVVRSYKVGDSYVTELRLD HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IRKMDKMRDYGEVQQVPEKRQMTLF HHHHHHHHHHHHHHHCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA