| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674194
Identifier: 147674194
GI number: 147674194
Start: 791966
End: 792496
Strand: Reverse
Name: 147674194
Synonym: VC0395_A0776
Alternate gene names: NA
Gene position: 792496-791966 (Counterclockwise)
Preceding gene: 147673916
Following gene: 147673400
Centisome position: 26.21
GC content: 55.74
Gene sequence:
>531_bases ATGAAACTCTGCCGCTGCCCGATTTGCCACAGCAACATCACCCTTGATGCGCTGATTGCCGATGATGCAGGCCGCGAGCT GCTAAGCCTAGTCGCCCAACTGCCGGACTTTGTAGCGCGCCCAATGATGGGTTACATCAGCCTGTTTCGCCCTGCAAAGT CTGACCTTTCCAACAGCCGCGCCCTGCGGCTGATTGGTGAAGTGTTGGAGCTGTACAAGGCCGATCATTTACTTGCAAGC GCGCTGATTGAATGCACCACCAAGCTGCGCGAAAAGCGCCAACAGCATGGTGATTCAAAGCCACTGGCAAACCACAACTA CCTCAAGAGTGTTTATAAAACCTTGGCGGTACGCAACAACGTGGCGGTGAGTGAGCCAACCGCAAACAGCGAAAAGGCCG AGCCACCAAGAGAAGACGTCAGCGCGTGGTACGTAGAGCGCGCAAACCAAATGCTCGCCCAAGGCAAAGACCCACTCGGC GAGAAAAGCCCCATCGCAGCCAAGCTGCGTGAACTTGGATGGAAAGCGTAG
Upstream 100 bases:
>100_bases ATATCCCAAACTTCTCCAAAGCTTCAGTGCTCTGTCGCCAGTATAAAAAGCTTGAAGGCATTGAGTTGGTCAGCGCGCAC TTTGTGAAAGCGGAGGGGCT
Downstream 100 bases:
>100_bases CGAAACAAGCAAGGTTCGCCTTGCTTGTCTGCCTAGCGTGGTTGCTAGGCACTGATGAGCAGCCAAGGGAGTTTTTATTA TGTTCGGTGAATACACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKLCRCPICHSNITLDALIADDAGRELLSLVAQLPDFVARPMMGYISLFRPAKSDLSNSRALRLIGEVLELYKADHLLAS ALIECTTKLREKRQQHGDSKPLANHNYLKSVYKTLAVRNNVAVSEPTANSEKAEPPREDVSAWYVERANQMLAQGKDPLG EKSPIAAKLRELGWKA
Sequences:
>Translated_176_residues MKLCRCPICHSNITLDALIADDAGRELLSLVAQLPDFVARPMMGYISLFRPAKSDLSNSRALRLIGEVLELYKADHLLAS ALIECTTKLREKRQQHGDSKPLANHNYLKSVYKTLAVRNNVAVSEPTANSEKAEPPREDVSAWYVERANQMLAQGKDPLG EKSPIAAKLRELGWKA >Mature_176_residues MKLCRCPICHSNITLDALIADDAGRELLSLVAQLPDFVARPMMGYISLFRPAKSDLSNSRALRLIGEVLELYKADHLLAS ALIECTTKLREKRQQHGDSKPLANHNYLKSVYKTLAVRNNVAVSEPTANSEKAEPPREDVSAWYVERANQMLAQGKDPLG EKSPIAAKLRELGWKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19567; Mature: 19567
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLCRCPICHSNITLDALIADDAGRELLSLVAQLPDFVARPMMGYISLFRPAKSDLSNSR CCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRLIGEVLELYKADHLLASALIECTTKLREKRQQHGDSKPLANHNYLKSVYKTLAVRNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC VAVSEPTANSEKAEPPREDVSAWYVERANQMLAQGKDPLGEKSPIAAKLRELGWKA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKLCRCPICHSNITLDALIADDAGRELLSLVAQLPDFVARPMMGYISLFRPAKSDLSNSR CCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRLIGEVLELYKADHLLASALIECTTKLREKRQQHGDSKPLANHNYLKSVYKTLAVRNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC VAVSEPTANSEKAEPPREDVSAWYVERANQMLAQGKDPLGEKSPIAAKLRELGWKA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]