| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674180
Identifier: 147674180
GI number: 147674180
Start: 1499254
End: 1500225
Strand: Reverse
Name: 147674180
Synonym: VC0395_A1397
Alternate gene names: NA
Gene position: 1500225-1499254 (Counterclockwise)
Preceding gene: 147674870
Following gene: 147673618
Centisome position: 49.61
GC content: 44.24
Gene sequence:
>972_bases ATGTCCGATGAACTGAAGCAATTAATGACCGCTCAACAAGCATTGAGCGATGCGCAAGAACTGAATGCCGCTGAAGCATT AACGATTTCTCAAAGTGAGGGAACAAAACTTGGTGAAGCCGTAGACTTGGGTGCTCTTTTGGGGCGTGCTCAGATGGCCG AAAGACTGTCAAAAATTACCGACGCCGTGAGTTTGAGTACATTGAAAGAAATCAAAGAGTCTAAGAAATACAAGGCTTTA AAAGGAATCACCTTTTCAAAAAGCTCGACTGTCGGCAGTAATTTAGTTGTTCTAAAAGGCACTTGGGAAGAGTTTTGTGA AATCTATGGCAGTTCAAAATCAACCGTTGATGAACGACTAAAAAATTTAGACGTATTTGGTGCTCAGGCTCTAGAGTCAA TGAGCGCAATAGGTATGACTACCAGAGACTTACGCCGACTTCGCCAACTGCCTCAAGAAGATTTGACCGCTATTGTTGAG GGTGAAGTGGTTAAAGTTCAAGACCGCGATGAAGCCTTGGAAATCATTGAAGAGCTGTCGGCAAAACATCGCCAAGAAAA ACAAGCTCTGCAATCCGAAGTCACTAAGTTGACACAAGAAAAACAATCTAACGAAAGGCTGCTAGCGGATAAAGATAAGA AGATTAATGACTTATCTAAGAAACTCGATACGCCGCTTTCACCAGCACAAGCGCGCCAGAAAGAAGAAGAACTCAACAGC AAGTTACTCGATCAATTGAACGTGGCAACTCTGGCCGTCGATAGTGGTTTGGCTCGTCTGTTTGATGCGATTCAAACGAT TCATGACAACCCACATCCGACCGATATTGATGCTGCTTGTGAAAATGCGTTGTTCCATACCCTAGAGCGACTCCTCGCTT TATCAGCAGACTTAGGGATTAGTGCGCACGTGCTTAGTCATTTAGAGCAATGGCATGCAGAAAATGGCCTGTTCTTGGGT AACGAGGGCTGA
Upstream 100 bases:
>100_bases CATTTTATCAAGTTAGCTTTCACTTATCGTAACGCCGTTCGCGCAGAAGTTGATCGCATTGGAGCTGAATTTAGAGAGTT AACAGGAGAGGATTTATAAG
Downstream 100 bases:
>100_bases TCCACGATGAATGCACTTGAATTAGAACGCGCACAATATCTTAAACGTCTGATGTCGGATCTTGACCGCTCTGGGCGTGG CCAAAAAGGGGTTATTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSDELKQLMTAQQALSDAQELNAAEALTISQSEGTKLGEAVDLGALLGRAQMAERLSKITDAVSLSTLKEIKESKKYKAL KGITFSKSSTVGSNLVVLKGTWEEFCEIYGSSKSTVDERLKNLDVFGAQALESMSAIGMTTRDLRRLRQLPQEDLTAIVE GEVVKVQDRDEALEIIEELSAKHRQEKQALQSEVTKLTQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEELNS KLLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDAACENALFHTLERLLALSADLGISAHVLSHLEQWHAENGLFLG NEG
Sequences:
>Translated_323_residues MSDELKQLMTAQQALSDAQELNAAEALTISQSEGTKLGEAVDLGALLGRAQMAERLSKITDAVSLSTLKEIKESKKYKAL KGITFSKSSTVGSNLVVLKGTWEEFCEIYGSSKSTVDERLKNLDVFGAQALESMSAIGMTTRDLRRLRQLPQEDLTAIVE GEVVKVQDRDEALEIIEELSAKHRQEKQALQSEVTKLTQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEELNS KLLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDAACENALFHTLERLLALSADLGISAHVLSHLEQWHAENGLFLG NEG >Mature_322_residues SDELKQLMTAQQALSDAQELNAAEALTISQSEGTKLGEAVDLGALLGRAQMAERLSKITDAVSLSTLKEIKESKKYKALK GITFSKSSTVGSNLVVLKGTWEEFCEIYGSSKSTVDERLKNLDVFGAQALESMSAIGMTTRDLRRLRQLPQEDLTAIVEG EVVKVQDRDEALEIIEELSAKHRQEKQALQSEVTKLTQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEELNSK LLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDAACENALFHTLERLLALSADLGISAHVLSHLEQWHAENGLFLGN EG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35543; Mature: 35411
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDELKQLMTAQQALSDAQELNAAEALTISQSEGTKLGEAVDLGALLGRAQMAERLSKIT CCHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DAVSLSTLKEIKESKKYKALKGITFSKSSTVGSNLVVLKGTWEEFCEIYGSSKSTVDERL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHH KNLDVFGAQALESMSAIGMTTRDLRRLRQLPQEDLTAIVEGEVVKVQDRDEALEIIEELS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCEEEECCHHHHHHHHHHHH AKHRQEKQALQSEVTKLTQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEELNS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH KLLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDAACENALFHTLERLLALSADLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH SAHVLSHLEQWHAENGLFLGNEG HHHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure SDELKQLMTAQQALSDAQELNAAEALTISQSEGTKLGEAVDLGALLGRAQMAERLSKIT CHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DAVSLSTLKEIKESKKYKALKGITFSKSSTVGSNLVVLKGTWEEFCEIYGSSKSTVDERL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHH KNLDVFGAQALESMSAIGMTTRDLRRLRQLPQEDLTAIVEGEVVKVQDRDEALEIIEELS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCEEEECCHHHHHHHHHHHH AKHRQEKQALQSEVTKLTQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEELNS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH KLLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDAACENALFHTLERLLALSADLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH SAHVLSHLEQWHAENGLFLGNEG HHHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA